DRSC/TRiP Functional Genomics Resources

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Protein Alignment MAN1 and lemd3

DIOPT Version :10

Sequence 1:NP_611873.1 Gene:MAN1 / 37838 FlyBaseID:FBgn0034962 Length:650 Species:Drosophila melanogaster
Sequence 2:XP_012813817.2 Gene:lemd3 / 100038042 XenbaseID:XB-GENE-486033 Length:783 Species:Xenopus tropicalis


Alignment Length:807 Identity:175/807 - (21%)
Similarity:291/807 - (36%) Gaps:215/807 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSDKELHRKLIQSGFPSTPVTETTRAVLIEKLRKHTRADKLKKRSNKYVL--------------- 58
            |:|:||..:|.:||....|||::||.|.::||:|.....:|:....:.|:               
 Frog     6 LTDEELFSELKRSGMMPGPVTDSTRPVYLKKLKKLREEQRLRHGKVRVVMNNNTVAAPSESEGIL 70

  Fly    59 ----------YSKE---------------------------------------QQESPP------ 68
                      ||::                                       |.|..|      
 Frog    71 KSGGDVTHKRYSRQSLPRESGKQSPILGFSSDESDADAGLGAHGSRRGRGNTPQSERKPVQQRGT 135

  Fly    69 ---------FPQYHQYHAPQPPQNYANGLDNNNDLDQ-----------------TGGSSAYNRSL 107
                     .|.:.:...||     .:..|:::|.|:                 .|...:|.|..
 Frog   136 ADGDTDRRKVPGWWEMRRPQ-----GDSEDDDDDDDEEEEEEAAMEEASKCRTMNGSRHSYYRDY 195

  Fly   108 DESDSSPLQLSASKMYAPPPVVASNYDGDCSPHSLGLNGKYLQPCSMPYAIDTSNNY---GKPSG 169
            .::|.     ...|...|..............|.:..|.....|.......|.|:.:   .:.|.
 Frog   196 SDTDE-----ELGKDEQPSRRNRRGSSKQARDHCMDRNDLPSWPGWSREVADVSHRHRGAARKSH 255

  Fly   170 KAKLSDGGVVNRLLSFRDTTIQRKFN-------YPTG------------------------QASR 203
            .|..|||  ...|....:..::..:|       :|:.                        |.|:
 Frog   256 TAADSDG--AGNLKRKSNNHLESSYNKDPPRVYFPSNSLPPRMPQSNHTAASNHNYSHYQYQGSK 318

  Fly   204 IPLRKERLTRFALSDLKSFIRNP-----DIRPYVIPRVLISLFLIFLTIITVLYV--------GK 255
            ..|.|......||  |:.|.|..     ....:.:...|::...:|..::.:.|:        |:
 Frog   319 RQLNKVSEPEEAL--LQQFKREEVSTAGGFSAHYLSMFLLTAACLFFLLLGLTYLRMRGTSLTGE 381

  Fly   256 RFEQSPIDKAALKYTLCNPNDMQMISEKVNCIEKDSLRGALDMSEELFRHLNERARLHHCKDANL 320
            ...:||.|....:.|:...|.:|.:.||::....|.:.|..|.     |:::.:....:.|....
 Frog   382 ENLRSPEDLNVDQSTIVLMNTLQKLHEKLSKTAGDYICGDTDR-----RNVSVQEASQYLKTLGK 441

  Fly   321 SPALEIGEFVREMVSNPKTHRGNLHSNLMAAKYLITENPQWSIQVVDSTKHLGQTSHFELSEPNL 385
            ....|....|..::.         ||.........:.:| .||..:.|.|:|      |.:.|.:
 Frog   442 EYEDEFNNTVAWILQ---------HSATRDVGIKCSSDP-GSILNITSVKYL------ESTLPRM 490

  Fly   386 PLKCIVLKKVTRFFTVI--GALLLIVAGFLIVYVAVVIYR-VKQKEALLAVDQFQKDIINELIYL 447
            ...|.:.:.|   .||.  .::.||..|.|...:..:.|| .|::|   ...|....::..:..|
 Frog   491 SFMCRIRRAV---ITVAHRSSIFLIGVGVLFGVLRYMKYRWAKEEE---ETKQMYDMVVKIIDVL 549

  Fly   448 SSQSES--------PEVVINQLQEKFLPAKKRSKLLSSWNKALKQLEKNDSRVLFGMVNRDGKAM 504
            .|.:|:        |...|..:::..:..:.|.|:...|::|::.|:.|:|||........|...
 Frog   550 KSHNEACQENKDLEPYTPIPHVRDSLILPQDRKKMKKVWDRAVEFLDANESRVRTETQKIGGADF 614

  Fly   505 RTIAW---NRNVDKKDVGLVKKWQSPAF--DNSNKIANPPTPCLKIRHMFDS-SEV-DQANLKQS 562
            :...|   :...||..|...|.||..||  |..|...|..|||||||:|||. .|: |..:|  :
 Frog   615 QVWKWIQPSSTCDKISVMPSKVWQGQAFHLDRRNSPPNSLTPCLKIRNMFDPVMEIGDHWDL--A 677

  Fly   563 IVESIIEKVGTRCKICDVQLDVQS--CCVYIRCASEEDAGTIHKEINGWWFDKRLISIKFLRLER 625
            |.|:|:||......|..:.:|..|  .|||::|.|.|.||...|.::|.|||.:|:::|:|||:|
 Frog   678 IQEAILEKCSDNEGIVHIAVDKNSREGCVYVKCLSPEFAGKAFKALHGSWFDGKLVTVKYLRLDR 742

  Fly   626 YLSRFPKPSAEPLYFHTN---EAANTH 649
            |..|||:.      |..|   :.:|||
 Frog   743 YHHRFPQA------FTCNTPLKPSNTH 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MAN1NP_611873.1 LEM 4..47 CDD:128813 16/37 (43%)
RRM_Man1 542..631 CDD:409728 40/92 (43%)
lemd3XP_012813817.2 LEM_Man1 2..45 CDD:240589 16/38 (42%)
MSC <404..620 CDD:430586 48/242 (20%)
RRM_Man1 657..748 CDD:409728 40/92 (43%)

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