DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chi and SLK1

DIOPT Version :10

Sequence 1:NP_726403.2 Gene:Chi / 37837 FlyBaseID:FBgn0013764 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_194282.2 Gene:SLK1 / 828657 AraportID:AT4G25520 Length:748 Species:Arabidopsis thaliana


Alignment Length:445 Identity:79/445 - (17%)
Similarity:140/445 - (31%) Gaps:141/445 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 QQMERIDQGFRRHNSYFSHTEHRVFELN----------KRLQQRNEESDNCWWDSFTTEFFEDDA 270
            ||.:::.|..::..:.......|.:|:.          ..||||..|:...:|..|..|:|...|
plant   160 QQQQQLRQQLQQQGTQQIPPNVRPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRA 224

  Fly   271 RLTILFCLEDGPKRYTIGR--------------------------TLIPRFFRSIYEGGVSDLYF 309
            :..:.....:....:.:|.                          .::.|.....:..|:.|...
plant   225 KQRLCLSQYESAGHHALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELL 289

  Fly   310 QLKHAKES-FHNTSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHR 373
            .|.|.:|: |.|..:.|:..:....|.|.:   .:|..:..|.:.|..|  ::|.||....:.|.
plant   290 YLDHPRENRFPNGLMMLEYRKAVQETVHEQ---FRVVREGHLRIIFSQD--LKILSWEFCARRHE 349

  Fly   374 ELIPRSVIGTSLPPDPMLLDQITKNITRAGI---------TNST--------------------L 409
            ||:.|.:|...:.....:..:....|:.:|.         :||.                    |
plant   350 ELLLRRLIAPQVNQLLQVAQKCQSTISESGSEGVSQQDLQSNSNMVLGAGRQLAKFMELQSLNDL 414

  Fly   410 NY-------LRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ----KWQRMVAPPGKKDPQRPP 463
            .|       |::..:::.|::||:......:.|.:.||..|.|    |.|               
plant   415 GYPKRYIRTLQISEVVKSMKDLMNFTGEQKIGPIEGLKRLLEQTVTVKLQ--------------- 464

  Fly   464 NKRRKRKGSNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQDVMVVGEPTLMGGEFGEEDERLITRL 528
              ::|.:.....|.|.:...||..|                ||:...|:.|.             
plant   465 --KQKMQEMEQFGNNGAINGPVQAQ----------------MVLTSGTMNGS------------- 498

  Fly   529 ENTQYDGTNAVEHDNHTGFGHADSPISGSNPWSIDRAGAIPASPGNGAAPQNNAN 583
                 .|.|...|....|.|....|..|.   .:..:|.:     :||...||:|
plant   499 -----TGNNTNNHHQIVGRGAMSGPAEGQ---MVISSGTV-----SGATANNNSN 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChiNP_726403.2 PPE <49..214 CDD:444372
LIM_bind 238..440 CDD:426444 47/274 (17%)
LID 503..531 CDD:465564 4/27 (15%)
SLK1NP_194282.2 LIM_bind 192..452 CDD:426444 45/264 (17%)
Blue background indicates that the domain is not in the aligned region.

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