Protein Alignment Chi and ldb2a

DIOPT Version :10

• Sequence 1: NP_726403.2
• Gene: Chi / 37837
• FlyBaseID: FBgn0013764
• Length: 596
• Species: Drosophila melanogaster
• Sequence 2: XP_005157399.3
• Gene: ldb2a / 30577
• ZFINID: ZDB-GENE-990415-136
• Length: 387
• Species: Danio rerio
• Alignment Length: 407
• Identity: 233/407 - (57%)
• Similarity: 286/407 - (70%)
• Gaps: 48/407 - (11%)

  Fly   198 PPASPFGHGGNHPMMGGPQQMERIDQGFRRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFT 262
            ||..||......|.             :|||:.|....|:|::|:|||||.|.||||:.|||:|.
Zfish     4 PPHDPFYSSPFGPF-------------YRRHSPYMVQPEYRIYEMNKRLQSRTEESDSLWWDAFA 55

  Fly   263 TEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDC 327
            |||||:||.||:.|||||||||||||||||||:|.:::||||:|||:.|||:||||||:.||:||
Zfish    56 TEFFEEDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESFHNSCITVDC 120

  Fly   328 DQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLL 392
            ||||::||||||.|||||.:.||||||.:||.||||:||..|:.:|||||||::... ..||.:|
Zfish   121 DQCTMVTQHGKPMFTKVCTEGRLILEFAFDDLMRIKTWHFNIRQYRELIPRSILAMH-AQDPGVL 184

  Fly   393 DQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPG-- 455
            :|::|||||.|:||.||||||||||||||||||||||.|.|||||||||.||||||||||||.
Zfish   185 EQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAGH 249

  Fly   456 -------------KKDPQR-PPNKRRKRKGSNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQ--DV 504
                         ||:|.| ...||||||.|.|...|:|.......:||||:. :|||:||  ||
Zfish   250 PQNFKTEIFPTNHKKEPTRQTTTKRRKRKNSASSASNSSLGNSAGGKKRSPAN-NFSLASQVPDV 313

  Fly   505 MVVGEPTLMGGEFGEEDERLITRLENTQYDGTNAVEHDNHTGFGHADSP-ISGSNPWSIDRAGAI 568
            ||||||||||||||:|||||||||||||||.||.::.|:    ....|| ::.::||:
Zfish   314 MVVGEPTLMGGEFGDEDERLITRLENTQYDATNGLDDDD----DFTSSPALANNSPWN------- 367

  Fly   569 PASP--GNGAAPQNNAN 583
             :.|  |..:.|::.|:
Zfish   368 -SKPPTGQDSKPESTAS 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chi	NP_726403.2	PPE	<49..214	CDD:444372	5/15 (33%)
		LIM_bind	238..440	CDD:426444	143/201 (71%)
		LID	503..531	CDD:465564	26/27 (96%)
ldb2a	XP_005157399.3	LIM_bind	31..232	CDD:426444	143/201 (71%)
		LID	312..340	CDD:465564	26/27 (96%)