Protein Alignment Chi and ldb1b

DIOPT Version :9

• Sequence 1: NP_726403.2
• Gene: Chi / 37837
• FlyBaseID: FBgn0013764
• Length: 596
• Species: Drosophila melanogaster
• Sequence 2: NP_001349250.1
• Gene: ldb1b / 30576
• ZFINID: ZDB-GENE-990415-135
• Length: 411
• Species: Danio rerio
• Alignment Length: 429
• Identity: 250/429 - (58%)
• Similarity: 305/429 - (71%)
• Gaps: 54/429 - (12%)

  Fly   189 SVGG------------QFNPMPPAS-----PFGHGGNHP--MMG---GPQQM---ERIDQGFRRH 228
            ||||            .::|..|.:     ||     ||  |:.   ||..|   ..::.|..||
Zfish     2 SVGGCACPGCSSKSFKLYSPKEPPNGSAFPPF-----HPGTMLDRDVGPTPMYPPTYLEPGIGRH 61

  Fly   229 NSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIP 293
            ..|.:.|::|:||||||||...||.||.|||:||||||||||.|||.||||||||||||||||||
Zfish    62 TPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIP 126

  Fly   294 RFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDD 358
            |:|||::|||.::||:.|||.||||||..::|||||||::||:|||.||:||.:.||.||||:||
Zfish   127 RYFRSVFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVTQNGKPMFTQVCVEGRLYLEFMFDD 191

  Fly   359 YMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQE 423
            .||||:||.:|:.||||||||::... ..||.:|||::|||||.|::||||||||||||||||||
Zfish   192 MMRIKTWHFSIRQHRELIPRSILAMH-AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQE 255

  Fly   424 LMSRHKAYALSPRDCLKTTLFQKWQRMVAPPGKKDPQR-PPNKRRKRK---GSN--SGGGNNSNT 482
            ||||||.|:|||||||||.||||||||||||.  :|.| .||||||||   |||  :|||:|:|:
Zfish   256 LMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPA--EPARQAPNKRRKRKMSGGSNMSAGGGSNNNS 318

  Fly   483 PPVTNQKRSPSGPSFSLSSQ--DVMVVGEPTLMGGEFGEEDERLITRLENTQYDGTNAVEHDNHT 545
               .|:|:||:. ||.||||  ||||||||||||||||:|||||||||||||:|..|.:  |:..
Zfish   319 ---NNKKKSPAN-SFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGI--DDED 377

  Fly   546 GFGHADSPISGS-NPWSIDRAGAIPASPGNGAAPQNNAN 583
            .|.  :||..|: :||:    ...|:|......|.:.|:
Zfish   378 SFN--NSPALGAHSPWN----NKPPSSQEKNENPTSQAS 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chi	NP_726403.2	LIM_bind	238..440	CDD:280051	146/201 (73%)
ldb1b	NP_001349250.1	LIM_bind	71..272	CDD:307769	146/201 (73%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170579859
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930