Protein Alignment Chi and Ldb2

DIOPT Version :10

• Sequence 1: NP_726403.2
• Gene: Chi / 37837
• FlyBaseID: FBgn0013764
• Length: 596
• Species: Drosophila melanogaster
• Sequence 2: NP_034828.3
• Gene: Ldb2 / 16826
• MGIID: 894670
• Length: 373
• Species: Mus musculus
• Alignment Length: 395
• Identity: 236/395 - (59%)
• Similarity: 287/395 - (72%)
• Gaps: 40/395 - (10%)

  Fly   196 PMPP--ASPFGHGGNHPMMGGPQQMERIDQGFRRHNSYFSHTEHRVFELNKRLQQRNEESDNCWW 258
            |..|  :||||     |.             :|||..|....|:|::|:|||||.|.|:|||.||
Mouse     5 PHDPFYSSPFG-----PF-------------YRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWW 51

  Fly   259 DSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSI 323
            |:|.||||||||.||:.|||||||||||||||||||:|.:::||||:|||:.|||:|||:||:||
Mouse    52 DAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSI 116

  Fly   324 TLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPD 388
            |:|||||.::||||||.|||||.:.||||||.:||.||||:||.||:.:|||:|||::... ..|
Mouse   117 TVDCDQCAMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH-AQD 180

  Fly   389 PMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAP 453
            |.:|||::|||||.|:||.||||||||||||||||||||||.|.|||||||||.|||||||||||
Mouse   181 PQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAP 245

  Fly   454 PGKKDPQR-PPNKRRKRKG-----SNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQ--DVMVVGEP 510
            |.  :|.| |..||||||.     |||..||.:|:  ..::|::|:. |.||::|  ||||||||
Mouse   246 PA--EPTRQPTTKRRKRKNSTSSTSNSSAGNTTNS--AGSKKKTPAA-SLSLATQVPDVMVVGEP 305

  Fly   511 TLMGGEFGEEDERLITRLENTQYDGTNAVEHDNHTGFGHADSPISGSN-PWSIDRAGAIPASPGN 574
            ||||||||:|||||||||||||||..|.:  |:...|.  :||..|:| ||: .:..|...:...
Mouse   306 TLMGGEFGDEDERLITRLENTQYDAANGM--DDEEDFN--NSPALGNNSPWN-SKPPATQETKSE 365

  Fly   575 GAAPQ 579
            .|.||
Mouse   366 NAPPQ 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chi	NP_726403.2	PPE	<49..214	CDD:444372	7/19 (37%)
		LIM_bind	238..440	CDD:426444	144/201 (72%)
		LID	503..531	CDD:465564	26/27 (96%)
Ldb2	NP_034828.3	LIM_bind	31..232	CDD:426444	144/201 (72%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	244..287		19/46 (41%)
		LID	298..326	CDD:465564	26/27 (96%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	327..373		16/49 (33%)