DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Xxylt and lge-1

DIOPT Version :9

Sequence 1:	NP_611871.2	Gene:	Xxylt / 37833	FlyBaseID:	FBgn0034959	Length:	458	Species:	Drosophila melanogaster
Sequence 2:	NP_509833.3	Gene:	lge-1 / 187206	WormBaseID:	WBGene00010716	Length:	631	Species:	Caenorhabditis elegans

Alignment Length:	311	Identity:	68/311 - (21%)
Similarity:	123/311 - (39%)	Gaps:	77/311 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   139 NYSSTQLELSSHLNGLSSDYNI--FVIYTR-----------------ENYHLNLKFDLFAHSLLK 184
            |||.:.. |.....|.||.:.|  ||.:||                 .|:...|.|.....|:||
Worm     4 NYSISYF-LLILFTGTSSYFTIWNFVDHTRVGAFPEEDYIRLAYIIGGNFMTRLMFMQHFKSVLK 67

  Fly   185 HTSAQLHLHVITDSESQPSVLEILQRQIRRFRRTVIYTIYDVKVCSSIIQDIAAKLSPYFSSTPN 249
            ::.....||:|||...:..:.|::             |.:::..|.....:: .:.....:..||
Worm    68 YSDHFFRLHLITDENHRSDIHELM-------------TSWNISNCEWFFHNL-TEFEKRVAWIPN 118

  Fly   250 SYYSDSLFFLSLGLHRIADRSLNRAILLDCDIVFRSDVRLLFNEFDNFLPHQLYGLAPELTPVYR 314
            |:||.......|.:..|....:.:.:.:|.||:|::::..|:.:|.||...|::|:...|:..|
Worm   119 SHYSKYYGLSKLLIPEIIGNDIGKIMFMDVDIIFQTNIFDLWKQFRNFNNSQVFGMVENLSDWY- 182

  Fly   315 HILYRYRVRYPKTSFGNPYYPINNEGGNQHSRVHHGYP----GLNSGVVLLLLNRIRN----SKS 371
                                 :|.:|...      .:|    |.|:|:::..|:::|.    ||.
Worm   183 ---------------------LNKDGKKS------VWPALGRGFNTGIIMFDLDKLRKNGWASKW 220

  Fly   372 YLEKLTHSEVHTLVAKYSFKGHLGDQDFFTLLGYEYPNLIYRLDCIWNRQL 422
            .:....:..:|...|       :.|||.|....::||..|.::.|.:|.||
Worm   221 RVVANKYLRIHGKTA-------MSDQDIFNAYIHDYPTEIIQIPCAYNYQL 264

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Xxylt	NP_611871.2	Glyco_tranf_GTA_type	172..>422	CDD:299700	53/257 (21%)
lge-1	NP_509833.3	GT8_LARGE_C	42..317	CDD:133053	56/272 (21%)
		RfaJ	62..>288	CDD:224359	53/252 (21%)
		Glyco_transf_49	354..603	CDD:290607
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3765
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810