DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3907 and efcab14

DIOPT Version :10

Sequence 1:NP_611870.3 Gene:CG3907 / 37832 FlyBaseID:FBgn0034958 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_004914044.1 Gene:efcab14 / 100380110 XenbaseID:XB-GENE-5791088 Length:464 Species:Xenopus tropicalis


Alignment Length:403 Identity:97/403 - (24%)
Similarity:167/403 - (41%) Gaps:88/403 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKMKKRRELDALIA---------SQSSSGKRANRRVPGGTNSQDKLLSVSTDDPEDYAWTNV--- 67
            ||||||:||:|||.         ::..||.|..|..|..::|       .||..|:..:.::   
 Frog    18 KKMKKRKELNALIGLAGDGGRKKAKKGSGHRLLRTEPPASDS-------DTDTEEEDEFGSLEDR 75

  Fly    68 -----AGSRRSHRKIAYFRMCGPLLFGIMGILIVGILYWLYFDLRQQLTDYRQKIEEVSAMSKNF 127
                 .||.....||.| .:||.::.....:..:| |.|:...|::.:...::|..   ||..|.
 Frog    76 HGRFGRGSFLQCCKICY-PLCGFVVLAACVVTCIG-LVWMQVVLKENMDALKEKFR---AMESNQ 135

  Fly   128 PDTLQRWHETSSYLLKNQTAVISEINDLQKSMESLRNNFSNLE---AAVAAQRNHGKD------- 182
            ..:|:...:.:..||..| ..:.:|...:|.:..|..|.:.:.   |.:.:..||.|.       
 Frog   136 KSSLEELPKINEDLLSKQ-KYLEDIMTGEKGLNKLWTNITEMNKQIAVLTSAVNHLKATIKSASE 199

  Fly   183 -----------EKLVADFGAKIEAVATDIEAIKEHYNKYTEVQKTLQAETEALKLNLSQLPTIQA 236
                       :|.||..|..:.:|..|:|.::    ..||.||   .:.|.|:.::..:..:| 
 Frog   200 LINLPNTMAELQKSVATLGNTLTSVHNDVETMQ----AVTEEQK---KKVETLQKDMQDVLFLQ- 256

  Fly   237 NALPANLSDDIAALNKTTF------NSFKLLANDLKNVNNTLSQTTKILSEEISLH-KTKIDDLL 294
                 |..||:    .||.      |.|||.:.|  :|.:.|:|...:...|  || .:|.:::.
 Frog   257 -----NSVDDM----NTTLQQYQRQNDFKLYSVD--SVLSNLTQRVALFEHE--LHFASKRENVS 308

  Fly   295 DRSENITSHVATISNSWPEYKQKVTSFDESLERIEKEITLANNKNNMLAASVDQLKNFCIQSMGN 359
            ..|.:.|:..:|:::  |..|...|.|.:.:....:..|| ..|..::.|..:|.:   |...| 
 Frog   309 LNSVDSTTSPSTVAD--PANKTTQTEFSQKVPGSGQPSTL-QQKLQLIHALTNQPE---IGKQG- 366

  Fly   360 IKAPSSEDGSVVP 372
            :|.||.  |..:|
 Frog   367 VKDPSG--GEALP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3907NP_611870.3 SMC_prok_B <105..>296 CDD:274008 48/218 (22%)
efcab14XP_004914044.1 ATG17_like <113..302 CDD:427715 47/213 (22%)
FRQ1 <403..460 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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