Protein Alignment Rsph4a and Rsph6a

DIOPT Version :9

• Sequence 1: NP_611869.1
• Gene: Rsph4a / 37831
• FlyBaseID: FBgn0034957
• Length: 708
• Species: Drosophila melanogaster
• Sequence 2: XP_008757131.1
• Gene: Rsph6a / 292684
• RGDID: 1306786
• Length: 705
• Species: Rattus norvegicus
• Alignment Length: 732
• Identity: 221/732 - (30%)
• Similarity: 326/732 - (44%)
• Gaps: 204/732 - (27%)

  Fly    42 PECSNVTSSSSSSTTTISIGAFD------------SQCNLHNARNPEAP-------NIGY----- 82
            ||..::.....|:....:.|..|            ||...|.....:.|       ::|:
  Rat   113 PEGQSLLEQLESNYQDSASGVLDQFNLYSREDDTFSQATQHGPYMRDDPTLHLGPSDLGFMPFVG 177

  Fly    83 --------ELNV--AKSILQKYSTLSGDNLFDHLSDIIKRVIDERPPNVIDFFEEFSRNVREQKF 137
                    ||.|  ||:.|.:.|.....:|::||.:::.:::::||.:.:...|..:|..:.:.|
  Rat   178 EVPDPEPRELAVQNAKAYLLQTSVSCNLSLYEHLVNLLTKILNQRPEDPLSILESLNRTTQWEWF 242

  Fly   138 HL--------PERFPPSGVFDEVRSFRVAKKILQSMKLPYV---VEGEDLMGEDLSVEDLRTNED 191
            |.        ||..|         ::.:|:|    .|..::   .|||..|.|:
  Rat   243 HPKLDTLRDDPEMQP---------TYEMAEK----QKALFIRGGGEGEQEMEEE----------- 283

  Fly   192 MRIVIDDSMRYFVTFNERVQQLQFYWTQCGFSISNDDIFQLASAMNRLQTHPSIMQCRFWGCING 256
               |.|..:       ..:.:..||:.|.|..:|:|:.|::..|:.:|.....|..|||||.|.|
  Rat   284 ---VTDSPV-------PNIMETAFYFEQAGVGLSSDESFRIFLALRQLVEQQPIHSCRFWGKILG 338

  Fly   257 LKASYYIVEASLTREEIASRLVMMEEEMRQKQIPFPMRKDREDKPPPAHIGPEL--TPGIYGWEE 319
            |..||.:.|... ||.        |||..::::...|.            |.|:  |.|    ||
  Rat   339 LSRSYLVAEVEF-REG--------EEEGEEEEVEEMME------------GGEVLETHG----EE 378

  Fly   320 FPPEELEKM-----KPKAAPVPLVEEMELYDIPPEFIGKGCNRYSYFVVNSLFDDWIELPIVTPR 379
            ...|:.||:     ||:..|.|:        ||.|....|.|:|.|||.|.....|..||.|||.
  Rat   379 EGEEDEEKVVDAVPKPQWKPPPV--------IPKEESRSGANKYLYFVCNEPGRPWTRLPHVTPA 435

  Fly   380 QIVVSRQIKKFLTGDLEADVISYPCFPGKEKHYLRTLIGRITAGTYIAPVGYYRRMTKKEQRMFD 444
            |||.:|:||||.||.|:..|||||.|||.|.:|||..|.||:|.|:|:|:|:|
  Rat   436 QIVCARKIKKFFTGFLDTPVISYPPFPGNEANYLRAQIARISAATHISPLGFY------------ 488

  Fly   445 GEEEEEGEEEEEEEEE-----EEFNEGEEEQIEDNDVMLLKNEKYEAEPLGSLATPVA-WVHVRS 503
                :.||||.:||||     :.|.|               |..:|..|:..|...:| |||...
  Rat   489 ----QFGEEEGDEEEEGGAGRDSFEE---------------NPDFEGIPVLELVDSMANWVHHTQ 534

  Fly   504 NILNQQGRVVWYDEEKARKEREKALALYLKMQMLGEMEEEVEEEEDEEEGEEEGEEEGMIEGFNQ 568
            :|| .|||..|.:                .||...|.||..||||..:||.||.|:
  Rat   535 HIL-PQGRCTWVN----------------PMQKTEEEEELGEEEEKADEGMEEVEQ--------- 573

  Fly   569 PELGPSILSSCAND-----MNPEVPVSWLARMTSKYTNQKERMLVMQSNVWPGAYTFIFEKTCES 628
             |:||.:|:..:.|     ::|     |..|::...:.|.. :.|::||:|||||.:...|..|:
  Rat   574 -EVGPPLLTPLSEDAEIMHLSP-----WTTRLSCSLSPQYS-VAVVRSNLWPGAYAYATGKKFEN 631

  Fly   629 IYLGWGHKYYARNI-PFKHLP-MVQEEFPHNPEDFVEANDPTVEEEEAYKAWLLRKQQKAEYVAE 691
            :|:||||||...|. |.  || ::|:|:|..|| .:|.:|||||||:|.||    .|::|...||
  Rat   632 LYIGWGHKYSPENFNPM--LPALIQQEYPSGPE-IMEMSDPTVEEEQALKA----AQEQALAAAE 689

  Fly   692 DIEDYDDDEFADQYDDD 708
            : |:.||:|..|:..:|
  Rat   690 E-EEEDDEEDEDEDLED 705

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsph4a	NP_611869.1	Radial_spoke	83..679	CDD:282555	201/628 (32%)
Rsph6a	XP_008757131.1	Radial_spoke	188..678	CDD:282555	197/623 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166353496
Domainoid	1	1.000	253	1.000	Domainoid score	I2002
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	259	1.000	Inparanoid score	I3052
OMA	1	1.010	-	-		QHG56376
OrthoDB	1	1.010	-	-		D166599at33208
OrthoFinder	1	1.000	-	-		FOG0005828
OrthoInspector	1	1.000	-	-		otm45314
orthoMCL	1	0.900	-	-		OOG6_102738
Panther	1	1.100	-	-	O	PTHR13159
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X4222
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	12	11.910