DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3860 and OSH6

DIOPT Version :9

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_012928.1 Gene:OSH6 / 853872 SGDID:S000001711 Length:448 Species:Saccharomyces cerevisiae


Alignment Length:435 Identity:101/435 - (23%)
Similarity:167/435 - (38%) Gaps:116/435 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ILKNCI-----GKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQQEHPADRMKYVAAFAV 89
            |:.|.|     |.||::||:|..:.|..|.|:|:...:::.:.|.:|..::.|..|..||..:.:
Yeast    50 IILNIISQLRPGCDLTRITLPTFILEKKSMLERVTNQLQFPEFLLQAHSEKDPLKRFLYVMKWYL 114

  Fly    90 SALASNWERLGKPFNPLLGETY-------ELQKGDYRIVCEQVSHHPPVSAFH--AESKDFKFHG 145
            :......:.:.||.||:|||.:       ..|:..|  :.||.|||||..|:.  ......:..|
Yeast   115 AGWHIAPKAVKKPLNPVLGEYFTAYWDLPNKQQAYY--ISEQTSHHPPECAYFYMIPESSIRVDG 177

  Fly   146 TISPKIKFWGKSVEVNPKGTVTVEF---------PKWNESYSWTNVNCCVHNIIVGRLWIEQYGK 201
            .:.||.:|.|.|......|:..::|         |   |.|..|..|..|..|:.|::.||....
Yeast   178 VVIPKSRFLGNSSAAMMDGSTVLQFLDIKDGNGKP---EKYVLTQPNVYVRGILFGKMRIELGDH 239

  Fly   202 MEITNHATGHVASLTFKSAGSGAKNLHRVEGFVKDASETNLYFLYGKWTEFIKCCSAESYVQFLK 266
            |.|  .:....|.:.||:.|........:||.|||......|.:.|||.:.:       |::.||
Yeast   240 MII--KSPNFQADIEFKTKGYVFGTYDAIEGTVKDYDGNAYYEISGKWNDVM-------YLKDLK 295

  Fly   267 QGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQEGDIPKSDSAYSLDI 331
            |           |..:||..   |::.|.:..|         ....|:.::|:.           
Yeast   296 Q-----------PRSSPKVF---LDTHKESPLR---------PKVRPLSEQGEY----------- 326

  Fly   332 PDSTTLWSCKPRPSNCSEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRPDILHLEEGNLDGAS 396
             :|..||.                                  ..||:        |...|...|:
Yeast   327 -ESRKLWK----------------------------------KVTDA--------LAVRNHPVAT 348

  Fly   397 KEKTRLEEKQRHTRKQRKSTNSDDWSPRWFKYATNPHTKIDDWLY 441
            :||.::|:.||...|:| ..:..::.|:.|: .:.|...:|..:|
Yeast   349 EEKFQIEDHQRQLAKKR-IEDGVEFHPKLFR-RSKPGEDLDYCIY 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..441 CDD:279564 100/433 (23%)
OSH6NP_012928.1 Oxysterol_BP 53..393 CDD:395990 100/432 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I1538
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.