DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3860 and ORP3C

DIOPT Version :9

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_200750.1 Gene:ORP3C / 836061 AraportID:AT5G59420 Length:457 Species:Arabidopsis thaliana


Alignment Length:427 Identity:137/427 - (32%)
Similarity:206/427 - (48%) Gaps:79/427 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SIWAILKNCIGKDL-SKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQQEHPADRMKYVAAFAV 89
            |.|.:::..||.|: |.:|:||::.||::.||::.|.|||:.||.:|.:.|.|..|:.|.:::|:
plant    68 SYWKMMQKYIGSDITSMVTLPVVIFEPMTMLQKMAEIMEYSHLLDQADECEDPYLRLVYASSWAI 132

  Fly    90 SALASNWERLGKPFNPLLGETYEL-QKGDYRIVCEQVSHHPPVSAFHAESKDFKFHGTISPKIKF 153
            |...: ::|..|||||:||||||: ..|....:.||||||||:||.|||::.|.:..|...|.|.
plant   133 SVYYA-FQRTWKPFNPILGETYEMVNHGGISFISEQVSHHPPMSAGHAENEHFIYDITSKLKTKL 196

  Fly   154 WGKSVEVNPKGTVTVEFPKWNESYSWTNVNCCVHNIIVGRLWIEQYGKMEITNHATGHVASLTFK 218
            .|.||:|.|.|...|...|.............:||:|.||.|::..|:|.:||..||....|.|:
plant   197 LGNSVDVYPVGRTRVTLKKDGVVLDLVPPLTKIHNLIFGRTWVDSPGEMVMTNLTTGDKVVLYFQ 261

  Fly   219 SAGSGAKNLHRVEGFVKDASETNLYFLYGKWTEFIKCCSAESYVQFLKQGTRKNDDYDGSPNGTP 283
            ..|......:.|:|:|..|:|.....:.|||.|                                
plant   262 PCGWFGSGRYEVDGYVYSAAEEPKIMMTGKWNE-------------------------------- 294

  Fly   284 KKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQEGD-IPKSDSAYSLDIPDSTTLWSCKPRPSNC 347
             ||                       ||.|.:.||: :|.:         :...:|.....|.| 
plant   295 -KM-----------------------SYQPCDAEGEPLPGT---------ELKEVWHLADVPKN- 325

  Fly   348 SEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRPDILHLEEGNLDGASKEKTRLEEKQRHTRKQ 412
             :.:|:||||.::|:.|:   .|..|..:|||:|||...||:|:|..|..||..|||:|| ..|:
plant   326 -DNFQYTHFAHKINSFDT---APAKLLASDSRIRPDRYSLEQGDLSKAGSEKHSLEERQR-AEKR 385

  Fly   413 RKSTNSDDWSPRWF----KYATNPHTKIDDWLYSGGY 445
            .:.|....::||||    :....|...|:.:.|:|.|
plant   386 TRETKGQKFTPRWFDLTDEITPTPWGDIEVYQYNGKY 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..441 CDD:279564 134/421 (32%)
ORP3CNP_200750.1 Oxysterol_BP 68..418 CDD:279564 134/421 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1737
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54233
OrthoDB 1 1.010 - - D863978at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10972
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.