DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3860 and ORP2B

DIOPT Version :10

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001327968.1 Gene:ORP2B / 826858 AraportID:AT4G12460 Length:694 Species:Arabidopsis thaliana


Alignment Length:465 Identity:155/465 - (33%)
Similarity:232/465 - (49%) Gaps:93/465 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GDYAEHVE-RTELPATMISRKEVSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQL 67
            |....|.: ||:||......:.||:|:::|:.:||||:::.:||..|||:|.||:..|.:||:.|
plant   301 GSVLTHFKRRTKLPDPAEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYL 365

  Fly    68 LTEAAQQEHPAD---RMKYVAAFAVSALASNWERLGKPFNPLLGETYEL---QKGDYRIVCEQVS 126
            |.:|.:......   |...|||||||..||...|..||||||||||||.   :|| .|...|:||
plant   366 LDQAYEYGKSGKSLLRALNVAAFAVSGYASTEGRHCKPFNPLLGETYEADFPEKG-IRFFSEKVS 429

  Fly   127 HHPPVSAFHAESKDFKFHGTISPKIKFWGKSVEVNPKGTVTVEFPKWNESYSWTNVNCCVHNIIV 191
            |||.|.|.|.|.|.:||.|..:.:.||||:|:::.|.|.:|:||.. .|.:.|:.|...::||::
plant   430 HHPTVIACHCEGKGWKFWGDTNLRSKFWGRSIQLEPVGILTLEFDD-GEIFQWSKVTTTIYNILL 493

  Fly   192 GRLWIEQYGKMEITNHATGHVASLTFKSAGSGAKNLHRVEGFVKDASETNLYFLYGKWTEFIKCC 256
            |:|:.:.:|.|:|..:.. :...|.||......:|.|:|.|||:|.:......::|||       
plant   494 GKLYCDHHGIMKIRGNRQ-YSCMLKFKEQSILDRNPHQVNGFVEDVTGKKAATVFGKW------- 550

  Fly   257 SAESYVQFLKQGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQEGDIP 321
                           ||                            |:..|:.|            
plant   551 ---------------ND----------------------------SLYYVAGD------------ 560

  Fly   322 KSDSAYSLDIPDSTTLWSCKPRPSNCSEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRPDILH 386
                  .::...::.||.....|.|.:. |.||.||:.||.:...::..|.  |||||||||..|
plant   561 ------GINKASASLLWKATKAPPNVTR-YNFTSFAMTLNELIPGLEEKLP--PTDSRLRPDQRH 616

  Fly   387 LEEGNLDGASKEKTRLEEKQRHTRKQRKSTNSDDWSPRWFKYATNPHTKIDDWLYSGGYWD---- 447
            ||.|..:.|::||.|||.:||.:|:.::|    .|.||||:    |..:.:.:.|:||||:    
plant   617 LENGEYEKANEEKQRLERRQRMSRQIQES----GWRPRWFE----PQGESESYKYTGGYWEARDV 673

  Fly   448 RKYDNTDTIF 457
            :.:|:...||
plant   674 KSWDDCPNIF 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..450 CDD:460126 145/433 (33%)
ORP2BNP_001327968.1 PH-like 28..163 CDD:473070
Oxysterol_BP 324..672 CDD:460126 145/429 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.