DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3860 and osbp

DIOPT Version :10

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_068076339.1 Gene:osbp / 564372 ZFINID:ZDB-GENE-090312-18 Length:832 Species:Danio rerio


Alignment Length:538 Identity:169/538 - (31%)
Similarity:230/538 - (42%) Gaps:152/538 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RTELPATMISRKEVSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQQEH 76
            ||.:|..  ....:::|:|:||||||:||||.|||..|||||.||||.|.:||.:||...|:.:.
Zfish   355 RTRIPDK--PNYSLNLWSIMKNCIGKELSKIPMPVNFNEPLSMLQRLSEDLEYYELLDRGAKCQS 417

  Fly    77 PADRMKYVAAFAVSALASNWERLGKPFNPLLGETYE---LQKGDYRIVCEQVSHHPPVSAFHAES 138
            ..::|.|||||.||:.::...|.|||||||||||:|   ||:..||.:|||||||||.:|.||.|
Zfish   418 SLEQMCYVAAFTVSSYSTTVHRTGKPFNPLLGETFELDRLQESGYRSLCEQVSHHPPAAAHHAIS 482

  Fly   139 -KDFKFHGTISPKIKFWGKSVEVNPKGTVTVEFPKWNESYSWTNVNCCVHNIIVGRLWIEQYGKM 202
             :.:.....|:...||.||.:.:.|.|::...|.|.|..|:|..|...|||||||:|||:|.|::
Zfish   483 ERGWTLRQEIALASKFRGKYLSIMPLGSIHCIFEKSNNHYTWKKVTTTVHNIIVGKLWIDQSGEI 547

  Fly   203 EITNHATGHVASLTFKSAGSGAKNLHR-VEGFVKDASETNLYFLYGKWTEFIKCCSAESYVQFLK 266
            :|.||.||....|.|......::::.| |.|.|.|......|.|.|.|.|.::|..       :.
Zfish   548 DIVNHRTGDRCHLKFAPYSYFSRDVARKVTGVVTDKDGKAHYVLSGTWDEKMECSR-------VM 605

  Fly   267 QGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQEGDIPKSDSAYSLDI 331
            |.:|      |..||...:..:...:.|                                     
Zfish   606 QSSR------GGENGADGRQKTVYQTLK------------------------------------- 627

  Fly   332 PDSTTLWSCKPRPSNCSEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRPDILHLEEGNLDGAS 396
              :..||...|.|......|.|:..||.||      :|...:.|||||.|||...:|:|..:.|:
Zfish   628 --AKELWRKTPLPEGAENMYYFSTLALTLN------EPEEGVAPTDSRKRPDQRLMEQGRWEEAN 684

  Fly   397 KEKTRLEEKQRHTRKQR------------------------------------------------ 413
            .||.|||||||..|::|                                                
Zfish   685 AEKQRLEEKQRTARREREREANRSANPEEGKEPADGALIEDSISDSPLKTEEVEIATEPSETTDK 749

  Fly   414 -----------------------------------KSTNSDDWSPRWFKYATNPHTKIDDWLYSG 443
                                               ||.:.|.:...||....:|.|.....:|.|
Zfish   750 TDTDETSSDLSLSTETLHGSHPPSYSMEGPYGAPVKSGHQDSYKAMWFDRCVDPMTGEPTHIYRG 814

  Fly   444 GYWDRK----YDNTDTIF 457
            |||:.|    :|:...||
Zfish   815 GYWETKEQGNWDSCPDIF 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..450 CDD:460126 163/515 (32%)
osbpXP_068076339.1 PH_OSBP_ORP4 15..113 CDD:270101
Oxysterol_BP 367..694 CDD:460126 145/384 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.