DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3860 and Osbpl8

DIOPT Version :10

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001296384.1 Gene:Osbpl8 / 314824 RGDID:1561474 Length:888 Species:Rattus norvegicus


Alignment Length:461 Identity:124/461 - (26%)
Similarity:191/461 - (41%) Gaps:116/461 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AEHVERTELPATMISRKEVSIWAILKNC-IGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTE 70
            |....:||   |:....:..||.:||.. .|.|||::.:|..:.||.|||.:|.:|..:|..|:|
  Rat   389 AGEASQTE---TVSEENKSLIWTLLKQVRPGMDLSRVVLPTFILEPRSFLDKLSDYYYHADFLSE 450

  Fly    71 AAQQEHPADRMKYVAAFAVSALASNWERLGKPFNPLLGETYEL--------QKGDYRIVCEQVSH 127
            ||.:|:|..|:|.|..:.:|......:.|.||:||:||||:..        .|..|  :.|||||
  Rat   451 AALEENPYFRLKRVVKWYLSGFYKKPKGLKKPYNPILGETFRCLWIHPRTNSKTFY--IAEQVSH 513

  Fly   128 HPPVSAFHAES-KD-FKFHGTISPKIKFWGKSVEVNPKGTVTVEFPKWNESYSWTNVNCCVHNII 190
            |||:|||:..: || |...|:|..|.||:|.|:....:|...:.|....|.|..|........|:
  Rat   514 HPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTMPYAHCKGIL 578

  Fly   191 VGRLWIEQYGKMEITNHATGHVASLTFK---SAGSGAKNLHRVEGFVKDASETNLYFLYGKWTEF 252
            .|.:.:|..|.:.||...||:.|.|.||   ..|| :..::::.|.:|...|. |..|.|.|   
  Rat   579 YGTMTLELGGTVNITCQKTGYSAILEFKLKPFLGS-SDYVNQISGKLKLGKEV-LATLEGHW--- 638

  Fly   253 IKCCSAESYVQFLKQGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQE 317
                .:|.::     ..:|.|:.:...|.||     .:..::|       |:....     .|::
  Rat   639 ----DSEVFI-----NDKKTDNSEIFWNPTP-----DIKQWRL-------IRHTVK-----FEEQ 677

  Fly   318 GDIPKSDSAYSLDIPDSTTLWSCKPRPSNCSEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRP 382
            .|.            :|..||.               .....:||.|..                
  Rat   678 DDF------------ESEKLWQ---------------RVTKAINAKDQT---------------- 699

  Fly   383 DILHLEEGNLDGASKEKTRLEEKQRHTRKQRKSTNSDDWSPRWFKYATNPHTKIDDWLYSGGYWD 447
                       .|::||..|||.||...:.|| |.:::|:.:.|:  .:|.|         |.|.
  Rat   700 -----------EATQEKYVLEEAQRQAARDRK-TKNEEWACKLFE--LDPLT---------GEWH 741

  Fly   448 RKYDNT 453
            .|:.:|
  Rat   742 YKFSDT 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..450 CDD:460126 118/437 (27%)
Osbpl8NP_001296384.1 PH_OPR5_ORP8 141..270 CDD:270103
Oxysterol_BP 406..752 CDD:460126 120/441 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.