DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3860 and obr-2

DIOPT Version :10

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_506695.2 Gene:obr-2 / 180003 WormBaseID:WBGene00008832 Length:436 Species:Caenorhabditis elegans


Alignment Length:451 Identity:163/451 - (36%)
Similarity:241/451 - (53%) Gaps:66/451 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ERTELPATMISRKEVSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQQE 75
            :||.||||.|:.::||||.|::..:|||.|:.|:||.:||||||||||.|.::|..||.:||:..
 Worm    29 QRTRLPATYIAPEDVSIWDIIRPNLGKDFSRFTVPVFMNEPLSFLQRLSENVQYNYLLEKAAKCS 93

  Fly    76 HPADRMKYVAAFAVSALASNWERLGKPFNPLLGETYELQKGDYRIVCEQVSHHPPVSAFHAESKD 140
            ...:|::||||||::.:::|.:||.|||||||.||:||::...|.:.||||||||:||.:|||.:
 Worm    94 DDMERIEYVAAFALATVSANHKRLSKPFNPLLLETFELERNGVRFLAEQVSHHPPISAVYAESDE 158

  Fly   141 FKFHGTISPKIKFWGKSVEVNPKGTVTVEFPKWNESYSWTNVNCCVHNIIVGRLWIEQYGKMEIT 205
            |...||:.|.:.||...:..||...:.:.|.|..|:|||:...|.::|:|:|::::.....|:|.
 Worm   159 FTVEGTVEPTLGFWMTKLLANPHAHLKLTFKKTGETYSWSAPKCAIYNVIMGKMYMNFTSHMKIE 223

  Fly   206 NHATGHVASLTFKSAG----SGAKNLHRVEGFVKDASETNLYFLYGKWTEFIKCCSAESYVQFLK 266
            :..| :.|..:|.:.|    .|. ::| |||.:.: .:..:..|||.||.|:..|..|.:....|
 Worm   224 SSGT-YDAVFSFDNKGYYNHKGG-DVH-VEGHIFE-GKNKIKALYGNWTLFLASCDNEDFKHHRK 284

  Fly   267 QGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQEGDIPKSDSAYSLDI 331
            :..|               ||::..|.|                     .:|.:          :
 Worm   285 EYLR---------------MFNETVSEK---------------------DQGPV----------V 303

  Fly   332 PDSTTLWSCKPRPSNCSEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRPDILHLEEGNLDGAS 396
            |.|..||.....|....:.:.||:|.|.||.|...|..  |:.|||||.|.|:..||:|..|.|.
 Worm   304 PGSKILWVSNQIPKLFDDQFHFTNFTLSLNEMYPGMSD--TVAPTDSRRRKDMKALEDGKNDEAE 366

  Fly   397 KEKTRLEEKQRHTRKQRKSTNSDDWSPRWFKYATNPHTKIDDWLYSGGYWDRKYDNTDTIF 457
            :.|.:.||:||    :|::|.:.| .|.||......|     |.|.||||||.|.|...:|
 Worm   367 EFKHKYEEEQR----ERRTTKTGD-VPMWFAKNDEGH-----WAYKGGYWDRDYSNCLELF 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..450 CDD:460126 152/427 (36%)
obr-2NP_506695.2 Oxysterol_BP 44..410 CDD:460126 152/427 (36%)

Return to query results.
Submit another query.