DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3860 and obr-1

DIOPT Version :9

Sequence 1:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001367172.1 Gene:obr-1 / 176555 WormBaseID:WBGene00012930 Length:842 Species:Caenorhabditis elegans


Alignment Length:462 Identity:157/462 - (33%)
Similarity:219/462 - (47%) Gaps:105/462 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ERTELPATMISRKEVSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQQE 75
            ||..||        :::|:|:||||||:||||.|||..:||:|.|||:.|.:|||.|| |...:.
 Worm   451 ERPNLP--------INLWSIMKNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLL-ETGAKL 506

  Fly    76 HPADRMKYVAAFAVSALASNWERLGKPFNPLLGETYELQKGD---YRIVCEQVSHHPPVSAFHAE 137
            ...::|.||||:|.|..::...|..||||||||||:|..:.|   :|.|.||||||||.:|.|||
 Worm   507 STLEQMCYVAAYAASNYSTTCHRTNKPFNPLLGETFEFDRMDDLGWRSVTEQVSHHPPAAAHHAE 571

  Fly   138 SKDFKFHGTISPKIKFWGKSVEVNPKGTVTVEFPKWNESYSWTNVNCCVHNIIVGRLWIEQYGKM 202
            ...:..:...:...:|.||.:.|.|.|...|.||.....:|:..:...|||||||:|||:.:|.|
 Worm   572 GNGWTMYQDFTMTSRFRGKYLSVIPIGFTHVVFPATKSHFSYRKITTTVHNIIVGKLWIDNHGDM 636

  Fly   203 EITNHATGHVASLTFKSAGSGAKNLHR-VEGFVKDASETNLYFLYGKWTEFIKCCSAESYVQFLK 266
            |||||.|.....|.|......::...| |.|.|:||.....|.:.|.|.:.|......|:     
 Worm   637 EITNHETNEKCLLKFVPYSYFSREQPRKVYGIVRDAEGIPKYVVQGTWDKSIDMLKVSSW----- 696

  Fly   267 QGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFRSLSIQDVSSDSYPPMEQEGDIPKSDSAYSLDI 331
                         ||..:|                                   ||      |::
 Worm   697 -------------NGNHEK-----------------------------------PK------LEV 707

  Fly   332 PDSTTL---WSCKPRPSNCSEYYQFTHFALQLNAMDSNMKPPLTLCPTDSRLRPDILHLEEGNLD 393
             |.|:|   |:..|.|.|..:.:.||..|::||      :|...:.|||||||||...:|.|..|
 Worm   708 -DETSLKRIWTANPLPKNAEKMHNFTKLAIELN------EPEEGVAPTDSRLRPDQRLMENGEWD 765

  Fly   394 GASKEKTRLEEKQRHTRKQR---------KSTNSDDWSPRWFKYATNPHTKIDD-------WLYS 442
            .|:::|..:|||||..|::|         |....:::.|.||       .::.|       ..:.
 Worm   766 EANRKKLEIEEKQRVVRRRREAEKELAMKKGDKYEEYEPTWF-------VRVQDESNGALIHQFK 823

  Fly   443 GGYWDRK 449
            ||||:.|
 Worm   824 GGYWEAK 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3860NP_001286802.1 Oxysterol_BP 26..441 CDD:279564 148/437 (34%)
obr-1NP_001367172.1 PH-like <170..238 CDD:418428
COG4372 202..>393 CDD:226809
Oxysterol_BP 458..828 CDD:395990 151/443 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3013
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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