DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pask and CIPK26

DIOPT Version :10

Sequence 1:NP_611864.1 Gene:Pask / 37824 FlyBaseID:FBgn0034950 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_850861.2 Gene:CIPK26 / 832246 AraportID:AT5G21326 Length:439 Species:Arabidopsis thaliana


Alignment Length:451 Identity:105/451 - (23%)
Similarity:185/451 - (41%) Gaps:101/451 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 SRPNSLSLVSKYEDELYLGDYSKYYTSIRQIGRGAYGYVNMAFRNSDRLLVITKFILKEKLCSQF 616
            :||.....|.|||    :|         :.:|:|.:..|..|........|..|.:.|||     
plant     2 NRPKVQRRVGKYE----VG---------KTLGQGTFAKVRCAVNTETGERVALKILDKEK----- 48

  Fly   617 MVKSRDCKEVPIEIHLLQTLNHKNIVSVLDVFENDLFYQLVMEKHGSGMDLWTFIERRPLMDEKL 681
            ::|.:..:::..||..::.:||.|:|.:.:|..:.....:|:| .|:|.:|:..|.....:.|:.
plant    49 VLKHKMAEQIRREICTMKLINHPNVVRLYEVLASKTKIYIVLE-FGTGGELFDKIVHDGRLKEEN 112

  Fly   682 GSYIFRQVADAVNYLHEQKILHRDIKDENIIIDQNFTIKLIDFGSATFMEEGK---FFSTFYGTT 743
            ....|:|:.:||:|.|.:.:.|||:|.||:::|....:|:.|||.:....:.:   ...|..||.
plant   113 ARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDAQGNLKVSDFGLSALSRQVRGDGLLHTACGTP 177

  Fly   744 EYCSPEVLAGNRYVGPELEIWALGVTLYVLMFFENPFID------VEETLKAEIQIPKAVSEQLS 802
            .|.:||||....|.|...::|:.||.|:||:....||.|      .::.:..|...|..:|....
plant   178 NYAAPEVLNDQGYDGATADLWSCGVILFVLLAGYLPFEDSNLMTLYKKIIAGEYHCPPWLSPGAK 242

  Fly   803 RLLSSMLNKDPKYRCTMHQLITDPWLTQEVNPSTFSFSWIVPCKAHEAN---------------- 851
            .|:..:|:.:|..|.|:.:::.|.|..:...|:.|.       :..|||                
plant   243 NLIVRILDPNPMTRITIPEVLGDAWFKKNYKPAVFE-------EKEEANLDDVDAVFKDSEEHHV 300

  Fly   852 -------PNLYFSGYLYSSTSVL---STISPQESFSH----------------IEESS------- 883
                   |....:..|.|.:..|   :....:|.|..                |||:|       
plant   301 TEKKEEQPTSMNAFELISMSRALDLGNLFEEEEGFKRETRFAAKGAANDLVQKIEEASKPLGFDI 365

  Fly   884 -------------IGGSDDARLASH--RTGHKLCVNEAKHNKMDTLYAKQF--QLNTSVSN 927
                         .|...:.|:|:.  :....|.:.|.:..|.|||...:|  :|:||:::
plant   366 QKKNYKMRLENVTAGRKGNLRVATEIFQVSPSLHMIEVRKTKGDTLEFHKFYKKLSTSLND 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaskNP_611864.1 PAS 70..171 CDD:473914
PAS 182..350 CDD:441804
PAS 286..>325 CDD:238075
STKc_PASK 575..828 CDD:270906 69/261 (26%)
CIPK26NP_850861.2 STKc_SnRK3 12..267 CDD:271133 73/273 (27%)
CIPK_C 312..426 CDD:213380 22/113 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.