DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pask and mark4b

DIOPT Version :10

Sequence 1:NP_611864.1 Gene:Pask / 37824 FlyBaseID:FBgn0034950 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_005157655.1 Gene:mark4b / 571279 ZFINID:ZDB-GENE-100330-2 Length:796 Species:Danio rerio


Alignment Length:560 Identity:129/560 - (23%)
Similarity:226/560 - (40%) Gaps:150/560 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 ASTVEQSLGQVIKTTAAQNSSRPNSLSLVSKYEDELYLGDYSKYYTSIRQIGRGAYGYVNMAFRN 596
            ||..|:..|...::..|:..:     |:.|..:::.::|:    |..::.||:|.:..|.:|.. 
Zfish    23 ASRSEKGSGWSSRSLGARCRN-----SIASCSDEQPHIGN----YRLLKTIGKGNFAKVKLARH- 77

  Fly   597 SDRLLVITKFILKEKLCSQFMVKSRDCKEVPIEIHLLQTLNHKNIVSVLDVFENDLFYQLVMEKH 661
                 ::|...:..|:..:..:.....:::..|:.:::.|||.|||.:.:|.|.:....|||| :
Zfish    78 -----ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKGLNHPNIVQLFEVIETEKTLYLVME-Y 136

  Fly   662 GSGMDLWTFIERRPLMDEKLGSYIFRQVADAVNYLHEQKILHRDIKDENIIIDQNFTIKLIDFGS 726
            .||.:::.::.....|.||.....|||:..||:|.|.:.|:|||:|.||:::|.:..||:.|||.
Zfish   137 ASGGEVFDYLVSHGRMKEKEARGKFRQIVSAVHYCHLKNIVHRDLKAENLLLDADSNIKIADFGF 201

  Fly   727 ATFMEEGKFFSTFYGTTEYCSPEVLAGNRYVGPELEIWALGVTLYVLMFFENPFIDV------EE 785
            :.....|....||.|:..|.:||:..|.:|.|||::||:|||.||.|:....||...      |.
Zfish   202 SNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGQNLKELRER 266

  Fly   786 TLKAEIQIPKAVSEQLSRLLSSMLNKDPKYRCTMHQLITDPWL-----TQEVNPSTFSFSWIVPC 845
            .|:.:.::|..:|.....:|...|..:|..|||:.|::.|.|:     ..|:.|      :|.|.
Zfish   267 VLRGKYRVPFYMSTDCEGILRRFLVLNPTKRCTLEQIMKDKWMNVGYENDELKP------YIEPV 325

  Fly   846 KAHEANP------------------------NLYFSGYLY------------------------- 861
            :.:....                        |..|:.||.                         
Zfish   326 EDYNDTSRVDVMVGMGYSRDEIKDALTTQKYNEIFATYLLLGRKNEDGMESRSSSSLSLARVRPS 390

  Fly   862 ---------------SSTSVLSTISPQESFS-------------------HIEES--SIGGSD-- 888
                           ||||..|...||.|.|                   |.:.|  |.|..|  
Zfish   391 AITNGTSKHSSTSSSSSTSASSHTKPQRSASTYHRQRRHSDFCGPSVPVAHPKRSPTSTGEGDLK 455

  Fly   889 DARLASHRTGHKL-----------CVNEAKHNKMDTLYAKQFQLNTSVSNHELRVSLPDSSHTEI 942
            :.||.|.:|...:           .|:.|.:.....:..::..:|.:.:|      :|.|:.|..
Zfish   456 EERLPSRKTSSSVVGSRSIPPSSPMVSTANNPNKSEIPDRRKDINATTNN------IPASAMTRR 514

  Fly   943 GGSICSSKS------------ENDIFKNKLQPC-VSTYNV 969
            ...:|:.::            ||....::|.|. .||:::
Zfish   515 NTYVCTDRTGTDRHSLLQNGKENSSLSHRLPPASPSTHSI 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaskNP_611864.1 PAS 70..171 CDD:473914
PAS 182..350 CDD:441804
PAS 286..>325 CDD:238075
STKc_PASK 575..828 CDD:270906 80/258 (31%)
mark4bXP_005157655.1 STKc_MARK 57..309 CDD:270974 80/262 (31%)
UBA_like_SF 327..369 CDD:473871 4/41 (10%)
MARK4_C 699..796 CDD:213382
Blue background indicates that the domain is not in the aligned region.

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