DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pask and AMPKalpha

DIOPT Version :10

Sequence 1:NP_611864.1 Gene:Pask / 37824 FlyBaseID:FBgn0034950 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster


Alignment Length:118 Identity:22/118 - (18%)
Similarity:38/118 - (32%) Gaps:39/118 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 TKNDSEKDMFSDSDHQHSPNGHEATGPKPNRTSVYTAKREVLPRSSKQSVRDLDNESSEEIERRK 378
            |||::|:..|.:.|..:..:|:.....|..:.:              :.:||....        .
  Fly    21 TKNENEQKSFVEQDSSYESSGNRFGSQKGKKIA--------------KVIRDACCS--------H 63

  Fly   379 AKTTDKTNVPTKEEGNKK-----------------ALFKLKKGINRKTVPKKE 414
            ..||..|.....:|||.:                 :|.|.|....::...|||
  Fly    64 CSTTTTTLWRKNDEGNLECNACNLYYRHNKVKRPLSLCKQKPTTRKRRQAKKE 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaskNP_611864.1 PAS 70..171 CDD:473914
PAS 182..350 CDD:441804 8/35 (23%)
PAS 286..>325 CDD:238075 5/10 (50%)
STKc_PASK 575..828 CDD:270906
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 19/114 (17%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Blue background indicates that the domain is not in the aligned region.

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