DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pask and sff

DIOPT Version :10

Sequence 1:NP_611864.1 Gene:Pask / 37824 FlyBaseID:FBgn0034950 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster


Alignment Length:441 Identity:105/441 - (23%)
Similarity:176/441 - (39%) Gaps:87/441 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 YLGDYSKYYTSIRQIGRGAYGYVNMAFRNSDRLLVITKFILKEKLCSQFMVKSRDCKEVPIEIHL 632
            ::|.|....|    :|:|..|.|.:.........|..|.|.:|||....::|      |..||.:
  Fly    14 FVGPYRLEKT----LGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMK------VEREIAI 68

  Fly   633 LQTLNHKNIVSVLDVFENDLFYQLVMEKHGSGMDLWTFIERRPLMDEKLGSYIFRQVADAVNYLH 697
            ::.::|.:::.:.||:||..:..|::| |.||.:|:.::.::..:..|.....|||:..|:::.|
  Fly    69 MKLIDHPHVLGLSDVYENKKYLYLILE-HVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCH 132

  Fly   698 EQKILHRDIKDENIIIDQNFTIKLIDFGSATFMEEGKFFSTFYGTTEYCSPEVLAGNRYVGPELE 762
            ...|.|||:|.||:::|:...||:.|||.|:....|....|..|:..|..|||:.|.:|.|.:.:
  Fly   133 SHSICHRDLKPENLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKAD 197

  Fly   763 IWALGVTLYVLMFFENPFID------VEETLKAEIQIPKAVSEQLSRLLSSMLNKDPKYRCTMHQ 821
            :|:.||.||.|:....||.|      :|:..:....||..|......||..|:..:|..|.|:.:
  Fly   198 VWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAE 262

  Fly   822 LITDPWLT-------------------------QEVNPSTFSFSWIVPC-------------KAH 848
            :...||:|                         ..|:|...:....:.|             .:|
  Fly   263 INRHPWVTAGGKGELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGCFKEKEKLIQELLSSSH 327

  Fly   849 EANPNLYF---------------SGYLYSSTSVLSTISPQESFSHIEESSIGGSDDARLASHRTG 898
            .....:||               ......|.|.|..:.|..  ..::...|.|::.........|
  Fly   328 NTEKVIYFLLLERKRRRPALEDDDEIAQKSRSELDAVDPPR--KRLDTCRINGTNAPSYGQISEG 390

  Fly   899 HKLCVNEAKHNKMDTLYAKQFQLNTSVSNHELRVSLPDSSHTEIGGSICSS 949
            ..|.......|         |:..:|..||:.|      |.|.:..|:.||
  Fly   391 SPLTPRRQAFN---------FRSYSSTRNHQRR------SPTTVTSSVRSS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaskNP_611864.1 PAS 70..171 CDD:473914
PAS 182..350 CDD:441804
PAS 286..>325 CDD:238075
STKc_PASK 575..828 CDD:270906 76/258 (29%)
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 78/263 (30%)
UBA_BRSK 298..350 CDD:270525 6/51 (12%)
Blue background indicates that the domain is not in the aligned region.

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