DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pask and Sik2

DIOPT Version :10

Sequence 1:NP_611864.1 Gene:Pask / 37824 FlyBaseID:FBgn0034950 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster


Alignment Length:580 Identity:138/580 - (23%)
Similarity:232/580 - (40%) Gaps:124/580 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 PADEFEVGSQSQVNESSLDK-----AKSASTETCDASG--SNPATRLLSSINGSFVGEAIHADGS 482
            |.|:.:...|.:.||..|||     .::..||...|.|  |:|....|.|               
  Fly    24 PEDQKKKQPQHERNEKQLDKPPENLPQNGKTEAKGAEGACSHPPLDALRS--------------- 73

  Fly   483 VIEVVYSVLLQILPCSNRVYCIWVCRNPSTRLDGEKYNYANLTSTFNSMASTVEQSLGQVIKTTA 547
                  ||||.....|..:..|..|:                           :..|.|.:..:.
  Fly    74 ------SVLLDAGAASPSIDAIVACK---------------------------DALLAQKLFASG 105

  Fly   548 AQNSSRPNSLSL-----------VSKYEDELYLGDYSKYYTSIRQIGRGAYGYVNMAFRNSDRLL 601
            ..::..|:..|.           :.|.::.:.:|    :|...|.||:|.:..|.:|...     
  Fly   106 GGSTPGPSPTSSAVGAGGISGKDLLKLKEPMRVG----FYDIERTIGKGNFAVVKLARHR----- 161

  Fly   602 VITKFILKEKLCSQFMVKSRDCKEVPIEIHLLQTLNHKNIVSVLDVFENDLFYQLVMEKHGSGMD 666
             |||..:..|:..:..:...:.::|..|:.:::.|.|.:|:.:..|.|......:|.|....| :
  Fly   162 -ITKNEVAIKIIDKSQLDQTNLQKVYREVEIMKRLKHPHIIKLYQVMETKNMIYIVSEYASQG-E 224

  Fly   667 LWTFIERRPLMDEKLGSYIFRQVADAVNYLHEQKILHRDIKDENIIIDQNFTIKLIDFGSATFME 731
            ::.:|.:...|.|....:.|.|:..||.|.|::.|:|||:|.||:::|.|..||:.|||.:...:
  Fly   225 IFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIVHRDLKAENLLLDLNMNIKIADFGFSNHFK 289

  Fly   732 EGKFFSTFYGTTEYCSPEVLAGNRYVGPELEIWALGVTLYVLMFFENPFIDV------EETLKAE 790
            .|:..:|:.|:..|.:|||..|.:|.|||::||:|||.||||:....||...      :..|...
  Fly   290 PGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLGVVLYVLVCGALPFDGSTLQSLRDRVLSGR 354

  Fly   791 IQIPKAVSEQLSRLLSSMLNKDPKYRCTMHQLITDPWLTQEVNPSTFSFSWIVPCKAHEANPNLY 855
            .:||..:|.:...|:..||..:|..|.|:.|:....|:..|:......           |..|| 
  Fly   355 FRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHRWMCPELLEHVLI-----------AKYNL- 407

  Fly   856 FSGYLYSSTSVLSTISPQESFSHIEESSIG-GSDDARLASHRTGHKLCVNEAKHNKMDTLYAKQF 919
                   .....:::.|.|....|....:| |||..|.:            .|.|..|.:.|...
  Fly   408 -------GAERQTSVEPSEDILRIMAEYVGIGSDKTRAS------------LKKNTYDHVAAIYL 453

  Fly   920 QLNTSVSNHE-----LRVSLPDSSHTEIGGSICSSKSENDIFKNKLQ---PCVSTYNVVS 971
            .|...||:.:     |..|...|| |.....|.||::::...:.:.|   ..:||.::::
  Fly   454 LLQDRVSHKKEQSNGLGASALASS-TSASRMIYSSRNDHQPTQQQSQQQSKTISTSSILA 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaskNP_611864.1 PAS 70..171 CDD:473914
PAS 182..350 CDD:441804
PAS 286..>325 CDD:238075
STKc_PASK 575..828 CDD:270906 78/258 (30%)
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 78/258 (30%)
UBA_SIK 418..458 CDD:270523 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.

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