DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pask and pask

DIOPT Version :9

Sequence 1:NP_611864.1 Gene:Pask / 37824 FlyBaseID:FBgn0034950 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_031758407.1 Gene:pask / 100488299 XenbaseID:XB-GENE-950862 Length:1200 Species:Xenopus tropicalis


Alignment Length:1196 Identity:315/1196 - (26%)
Similarity:492/1196 - (41%) Gaps:390/1196 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSSSNAQ--CSRNRCANDDPIMGSHSQSRQNSSGMLNMMDASSFSMPPPNLH------------- 64
            ||.|..|  |.|.|      ..|...:||.|::. |...|.||:|:.....|             
 Frog    31 LSKSFPQIPCPRQR------RHGGREKSRWNTAS-LTGEDWSSYSLSAATSHILLRSNHESNGIP 88

  Fly    65 --------SSKVINPNKAIFTIDANTGQIFIVNNKACQLLGYTSQELRNKGFFDLLNGKTESH-I 120
                    .|...:.|:|:.|:...|.:|.:.|:|||:|..|:|.||.......|:  ...|| :
 Frog    89 MDDTNQSLPSCARSSNRAVLTVSTKTSKILMANDKACRLFEYSSPELIGMSLSQLI--PASSHRV 151

  Fly   121 SSLAEMQIEGDEG--RVVLLSGKVIEMKTKSGGKILVSLWIRQISSDGRHIAVAEPVERHICHIS 183
            |...|.::...:|  ||   .|:|:|...:.|..|.:.:|||:|.:  :.:.:.|.|::....:|
 Frog   152 SEALEDELTESDGFSRV---PGEVVEAVRRGGETITLCMWIRRIQN--QCLLLLETVQQITATVS 211

  Fly   184 TDRSGVITSVDSTTATIFFYESVESVVGVSIVTLIPFIKLPDPDSREIPKSLRKQRATGRTTDNV 248
            ..:.|.|.|.|.|.|.::.|...|.|:|..|..|:|.:.:| ...||||::||.||..|.|.|..
 Frog   212 FRQDGRILSCDPTCARLYGYMEPEEVLGQHITDLLPTVNIP-LQGREIPQNLRCQRLVGVTRDGA 275

  Fly   249 KFPLCLLIALDEDASAGYSHSGKTGLNI-----TVWVFQNLSGLIVVDDIGNILMCNQPFSLLMF 308
            .|||.|.::   :||.      .||.::     ::.:..:::|||.:...|:|...|..||..:|
 Frog   276 NFPLSLNLS---EASV------DTGSHVEEYCASLSILSSINGLITLRPDGSIRGLNGSFSNSLF 331

  Fly   309 GYGQDKIMNMHISAILPNF---GKDSREEKSP-----------NVSNTSITSN-----DWEPDT- 353
            ||.:.:::..:|:.::|.|   .:.:.:|.||           :.|:..|:||     ..|.|| 
 Frog   332 GYDRTQLLGKNITFLIPGFYHYMRSAGDEPSPLLTPLGETLDTSGSSDMISSNATKEKSSEHDTF 396

  Fly   354 -DPLVVDNDSSLQSCKKSSTNRT----APNNEQSSVGDA-------------------------- 387
             :||...|.....:|....|::|    |.||::.:|..|                          
 Frog   397 HNPLSDGNWLQAPACCILQTSQTPLTRAVNNQEMAVSSAPENDYLQSVPTCCVSPGTPTQDEPWE 461

  Fly   388 ---HLSCNLENSSGL--------------------------------------FCDLRQPDDCTI 411
               :...:|:..||:                                      |..:..|....:
 Frog   462 REKYTRHDLDLESGITPLTHCLRTLSLSKSQSEKKEAHQHINSHQVFPTVEKAFSPVLSPCPSAV 526

  Fly   412 DDILTPVNASNSFPADEFEV----GSQS------------------------------QVNESSL 442
            .:|..|.||....|....:|    ||.|                              .:||::.
 Frog   527 GEIHQPPNALGVSPPITVQVTRLPGSPSFLSETTSIPLRNVCSNAHHHGTLLQAEITHNMNETNA 591

  Fly   443 DKA----------------------KSASTETCDASGSN-------------------------- 459
            .::                      |:||....:.:|:|                          
 Frog   592 ARSTPSANNIPVISSPPLCHHNPVIKTASVIHANNAGANNTPSSTLHNNLSLSPVSTVSFSEYIM 656

  Fly   460 ----------------------PATRLLSSI---------------------------------- 468
                                  |.:.:||.:                                  
 Frog   657 QSTANTSCSPDKIPTIVDADSCPTSSVLSPLPTELSTENKDSESLVGGVFLYNRNSPTPNLSPCR 721

  Fly   469 ----------------------------------------------------------------- 468
                                                                             
 Frog   722 SVEPDAVNRLSREESSPIPPSQEGESNRYSSETLSQVTSTPVKDDSPHSLQLESADLSHKELQVP 786

  Fly   469 -------NGSFVGEAIHADGSVIEVVYSVLLQILPCSNRVYCIWVCRN---------PSTRLDGE 517
                   .|.|.|...|.|||.:.:.:.| .:.:...:.::.:||.::         ..|||   
 Frog   787 FAGGEIREGIFNGSCYHRDGSRLFIQFDV-QRTVSAGSYLFNVWVSKDLLQSQRDAIARTRL--- 847

  Fly   518 KYNYANLTSTFNSMASTV----EQSLGQVIKTTA-AQNSSRPNSLSLVSKYEDELYLGDYSKYYT 577
                  |.|:|.|.:.::    |:|||::|:.:| |...:....|.:|....     |.|:..|.
 Frog   848 ------LLSSFASSSQSLLEQSERSLGELIRNSANAGYCTELQDLQIVGACN-----GQYALKYQ 901

  Fly   578 SIRQIGRGAYGYV-NMAFRNSDRLLVITKFILKEKLCSQFMVKSRDCKEVPIEIHLLQTLNHKNI 641
            ::..:|:||:|:| :...|:|.:..|:.|||.|:::.....|:..:..:|..||.:|..:.|.||
 Frog   902 TVSPLGKGAFGFVWSACGRDSAKEEVVVKFIRKDRVLDDCWVQDPELGKVTQEIAILSRVQHPNI 966

  Fly   642 VSVLDVFENDLFYQLVMEKHGSGMDLWTFIERRPLMDEKLGSYIFRQVADAVNYLHEQKILHRDI 706
            :.|:||||||.|:|||||.||.|:||:.||:.:|.:||.|.||||||:..||.|||.|.||||||
 Frog   967 IRVVDVFENDTFFQLVMELHGDGLDLFDFIDSQPSLDEPLASYIFRQLVSAVGYLHNQHILHRDI 1031

  Fly   707 KDENIIIDQNFTIKLIDFGSATFMEEGKFFSTFYGTTEYCSPEVLAGNRYVGPELEIWALGVTLY 771
            |||||||..:|:|||:|||||..:.:|..||||.||||||:||||.||.|.|||||:|:||||||
 Frog  1032 KDENIIIAPDFSIKLVDFGSAAHLHQGTLFSTFCGTTEYCAPEVLLGNPYPGPELEMWSLGVTLY 1096

  Fly   772 VLMFFENPFIDVEETLKAEIQIPKAVSEQLSRLLSSMLNKDPKYRCTMHQLITDPWLTQEVNPST 836
            .|:|.||||.:|:|.|:||:..|..||::|..|:|.:|.:||:.|.|:.:|:.|||:||.:|.:.
 Frog  1097 TLIFGENPFCEVDEILEAELNPPFNVSQKLQVLISGLLQRDPEIRMTLDELLRDPWVTQPINLAE 1161

  Fly   837 FSFSWIV-PCKAH--EANPNLYFSGY 859
            :::..:. |..:|  :..|.|....|
 Frog  1162 YTWEEVYPPASSHKDDDGPGLCPDSY 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaskNP_611864.1 PAS_9 74..169 CDD:290162 30/97 (31%)
PAS 74..169 CDD:238075 30/97 (31%)
PAS_9 286..>335 CDD:290162 14/51 (27%)
PAS 286..>325 CDD:238075 12/38 (32%)
STKc_PASK 575..828 CDD:270906 134/253 (53%)
S_TKc 576..828 CDD:214567 134/252 (53%)
paskXP_031758407.1 PAS 116..206 CDD:238075 29/96 (30%)
PAS 215..301 CDD:238075 33/95 (35%)
PKc_like 899..1153 CDD:419665 134/253 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 279 1.000 Domainoid score I1676
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153824at33208
OrthoFinder 1 1.000 - - FOG0004753
OrthoInspector 1 1.000 - - oto105398
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5095
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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