DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and ROX1

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_015390.1 Gene:ROX1 / 856178 SGDID:S000006269 Length:368 Species:Saccharomyces cerevisiae


Alignment Length:378 Identity:83/378 - (21%)
Similarity:149/378 - (39%) Gaps:78/378 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 KHSPGHIKRPMNAFMVWSQMERRKICE-------RTPDLHNAEISKELGRRWQLLSKDDKQPYII 238
            |.|...|.||.|||:::.|...|.:.:       ..|  ||:.|||.:|.:|:.|..:||..:..
Yeast     4 KSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIP--HNSNISKIIGTKWKGLQPEDKAHWEN 66

  Fly   239 EAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNN----------NNSLTT 293
            .|||.:..|..:||.|||:|.:|..:....||..:.....:.:......          ||::..
Yeast    67 LAEKEKLEHERKYPEYKYKPVRKSKKKQLLLKEIEQQQQQQQKEQQQQKQSQPQLQQPFNNNIVL 131

  Fly   294 LAINGTTTAGRKSKRSTSTCQSGSASKRLRNDSGDTSSKPKYEVKMESAEQLNSADIILPSADNL 358
            :            ||:.|...|.|           .||...|:.::.:  .|....|...:..|.
Yeast   132 M------------KRAHSLSPSSS-----------VSSSNSYQFQLNN--DLKRLPIPSVNTSNY 171

  Fly   359 ISYQSSEYLPLSTLSNADCDEKLHSELSSGPLESRENLSEVVNRFLPL--------------FLG 409
            :..:|...|||:....|....:|.|:|:|.|..|..:.....:.:|.:              |:.
Yeast   172 MVSRSLSGLPLTHDKTARDLPQLSSQLNSIPYYSAPHDPSTRHHYLNVAQAQPRANSTPQLPFIS 236

  Fly   410 G--NEDSQLGVSSLTQSQHN--------QSDPTAGLMDNISDISPINDREELTEEVMRYLPYLEV 464
            .  |..||..|::.|.|...        .|.|.:.:::| :.::.||:..:.....:  ||.|:.
Yeast   237 SIINNSSQTPVTTTTTSTTTATSSPGKFSSSPNSSVLEN-NRLNSINNSNQYLPPPL--LPSLQD 298

  Fly   465 NPSSDGLTLKVESSSLLGKPLNEPVFDSEDNIVNDANLHSASHQIPPYVPDSH 517
            ........||....:.:.|||:.    :.:|:::..   :.:|...|::|:.:
Yeast   299 FQLDQYQQLKQMGPTYIVKPLSH----TRNNLLSTT---TPTHHHIPHIPNQN 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 27/77 (35%)
ROX1NP_015390.1 MATA_HMG-box 9..88 CDD:238685 29/80 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1275
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.790

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