Protein Alignment Sox14 and HMGB1

DIOPT Version :10

• Sequence 1: NP_476894.1
• Gene: Sox14 / 37822
• FlyBaseID: FBgn0005612
• Length: 669
• Species: Drosophila melanogaster
• Sequence 2: NP_974413.1
• Gene: HMGB1 / 824351
• AraportID: AT3G51880
• Length: 185
• Species: Arabidopsis thaliana
• Alignment Length: 127
• Identity: 30/127 - (23%)
• Similarity: 52/127 - (40%)
• Gaps: 4/127 - (3%)

  Fly   161 GSARVPVNSSTPYSDATRTK-KHSPGHIKRPMNAFMVWSQMERRKICERTPDLHN-AEISKELGR 223
            |..:.|....|........| |..|...||..:||.|:.:..|....:..|::.. :.:.|..|:
plant    26 GKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQ 90

  Fly   224 RWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTT 285
            :|:.:|:.:|.||..:|.|.:..:..:...|....::....|..|.....|.|  ||..:.|
plant    91 KWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEINDED--EASGEVT 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox14	NP_476894.1	HMG-box_SoxC	186..261	CDD:438838	17/75 (23%)
HMGB1	NP_974413.1	PRK05901	1..>171	CDD:235640	30/127 (24%)
		HMG-box_AtHMGB1-like	54..114	CDD:438821	16/59 (27%)