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Protein Alignment Sox14 and Sox12
DIOPT Version :9
Sequence 1: | NP_001286801.1 |
Gene: | Sox14 / 37822 |
FlyBaseID: | FBgn0005612 |
Length: | 669 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001162121.1 |
Gene: | Sox12 / 689988 |
RGDID: | 1586313 |
Length: | 314 |
Species: | Rattus norvegicus |
Alignment Length: | 177 |
Identity: | 74/177 - (41%) |
Similarity: | 94/177 - (53%) |
Gaps: | 25/177 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 163 ARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQL 227
||.|....|| .|||||||||||||||.|||||.::.||:|||||||.|||||||
Rat 27 AREPGWCKTP-----------SGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQL 80
Fly 228 LSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNNNSLT 292
|...:|.|::.|||:||..||.:||:|||||:||...:|...:|.....| ...:.|.
Rat 81 LQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARPRPPGGG--------GGGSRLK 137
Fly 293 TLAINGTTTAGRKSKRSTSTCQSGSASKRLRNDSGDTSSKPKYEVKM 339
. |....||..:|:|.....|.|: ...|..:...:...||::
Rat 138 P----GPQLPGRGGRRATGGPLGGGAA--APEDDDEDEEEELLEVRL 178
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166342386 |
Domainoid |
1 |
1.000 |
106 |
1.000 |
Domainoid score |
I6444 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0527 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000028 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm44720 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10270 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.930 |
|
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