DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and Synpo2l

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001297360.1 Gene:Synpo2l / 68760 MGIID:1916010 Length:978 Species:Mus musculus


Alignment Length:682 Identity:144/682 - (21%)
Similarity:211/682 - (30%) Gaps:246/682 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IAKPNQATTEPP----LSLRPGTVPTV-----------PATTP------ARPATITIQRRH---- 41
            :..|.:|.:.||    |.|.|.:||.|           |...|      |||.|..:|.:.    
Mouse   419 LQSPPRAQSAPPEAAVLPLSPLSVPAVSPTPFFPDGGAPIPAPSIFNRSARPFTPGLQGQRSGTT 483

  Fly    42 --------------------PAPKADSTPHTLPPFSPSPSPASSPSPAPAQTP--GA----QKTQ 80
                                |||    :|...||..|:|.| |..:..|:.||  ||    |::.
Mouse   484 SVIFRPLAPKKVNEGLGSTSPAP----SPFAAPPQGPTPLP-SFTTVVPSHTPVSGASSSTQRSS 543

  Fly    81 SQAAITHPAAVASPSAPVAAAAPKTPKTPEPRSTHTHTHTHSQHFSPPPRES---EMDGERSPS- 141
            .....|....:.:||.||....  .|:.|.|.|....|.|.|...|.|.|.|   |..|...|. 
Mouse   544 GPVTATSSLYIPAPSRPVTPGG--APEPPTPPSAAAMTSTASIFLSTPLRNSARPEAPGPAVPEP 606

  Fly   142 HSGHEMTLSMDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKIC 206
            .|..|..:|:....:.::..:.|          ..||.:...||.                    
Mouse   607 ASVREQRISVPAARTGILQEARR----------RGTRKQMFRPGK-------------------- 641

  Fly   207 ERTPDLHNAEISK------ELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQ------ 259
            |.|.:..|.|:..      |..|.....|..::....:.||....:..:...:||..||      
Mouse   642 EETKNSPNPELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPLGGRSYKTLPQVSPKTP 706

  Fly   260 -----------KKQTRSPGSLKPNQDA--DGCEARNDTTNNNNSLTTLAI---------NGTTTA 302
                       ..:|..|.:.||....  ||..        |.|...:.|         .|...|
Mouse   707 PPMAPKTPPPTTPKTPPPVAPKPGSRGLLDGLV--------NGSTPMVGIPEPPRLQGRGGELFA 763

  Fly   303 GRKSKRSTSTCQSGSASK-----RLRNDSGDTSSKPKYEVKMESAEQLNSADIILPSADNLISYQ 362
            .|:|:......::.|.|.     |.|:.|...|..|.::.         |.:|..|..   |:|.
Mouse   764 KRQSRADRYVVEATSGSSLNPGLRPRSPSPTPSLPPSWKY---------SPNIRAPPP---IAYN 816

  Fly   363 S--SEYLPLS--TLSNADCDEKLHSELSSGPLESRENLSEVVNRFLPLFLGGNEDSQLGVSSLTQ 423
            .  |.:.|.:  ||.|        ...|.||            |..|         :.|:.:|..
Mouse   817 PLLSPFFPQAARTLPN--------KAQSQGP------------RVTP---------KQGIKALDF 852

  Fly   424 SQH----------------NQSDPTAGLMDNISDISPINDREELTEEVMRY---LPYLEVNPSSD 469
            .:|                :...||:|        .|...|   .:|:.|:   .|    .|:::
Mouse   853 MRHQPYQLKTAMFCFDEGSSTPGPTSG--------PPKTAR---VQEIRRFSTPAP----QPTAE 902

  Fly   470 GL--TLKVESSSLLGKPLNEPVFDSEDNIVNDANLHSASHQIP-PYVPDSHDCFA---EDCGGDS 528
            .|  |:.|..::   ..|:||::.:|          .||..:| |...:|...||   ..||   
Mouse   903 PLAPTVLVPRAA---TTLDEPIWRAE----------LASTPVPNPDHQESLRSFAAAPSSCG--- 951

  Fly   529 SSHQVEFEVVRPQTVTMTMTCTLPYGGPDAGH 560
                  |:|.||:..............|.|||
Mouse   952 ------FQVARPRFSATRTGLQAHVWRPGAGH 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 11/76 (14%)
Synpo2lNP_001297360.1 PDZ_signaling 6..85 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..217
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..352
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 494..652 46/194 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 690..734 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 775..800 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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