DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and sox11

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001008053.1 Gene:sox11 / 493415 XenbaseID:XB-GENE-483418 Length:383 Species:Xenopus tropicalis


Alignment Length:436 Identity:129/436 - (29%)
Similarity:187/436 - (42%) Gaps:112/436 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 SQHFSPPPRESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGH 186
            |||..|...|.|.                         ...:.|.::.|.|  |..:|   :.||
 Frog    13 SQHTEPDTEEGEF-------------------------MACSPVALDESDP--DWCKT---ATGH 47

  Fly   187 IKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEY 251
            ||||||||||||::|||||.|::||:|||||||.||:||::|:..:|.|:|.|||:||..||.:|
 Frog    48 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADY 112

  Fly   252 PNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNNNSLTTLAINGTTTAGRK------SKRST 310
            |:|||||:||....|.:.||...|...|....               :.:||:|      ...|.
 Frog   113 PDYKYRPRKKPKVDPSASKPASLAQSPEKSPK---------------SRSAGKKCPKLKPGSHSG 162

  Fly   311 STCQSGSA-SKRLRNDSGDTS---SKPKYEVKMESAEQLNSADIILPSADNLISYQSSEYLPLS- 370
            |:..|||| |..::::.|...   ..||...|        :|..:....|:....:..|...|. 
 Frog   163 SSSSSGSAKSLTIKSEYGGDDYVFGSPKAASK--------AAKCVFMDEDDEEEEEDEEEDELQI 219

  Fly   371 TLSNADCDEKLHS----------ELSSGPLESRENLS---EVVN--RFLPLFLGGNEDSQLGVSS 420
            .:...:.||.|..          .|||...||.|..|   :|.|  |....|....:.|.:..::
 Frog   220 RIKQEEEDEPLRQYNVAKVPASPTLSSSSAESAEGASMYEDVRNGTRLYYNFKNITKQSTIPQAT 284

  Fly   421 LTQSQHNQSDPTAGLMDNISDISPINDREELTEEV-----MRYLPYLEV-NPSSDGLTLKVESSS 479
            :|.:...:|..|.         ||.:.::||..::     .:..|..|: ||:|..|:|     |
 Frog   285 ITLAPAPRSAGTT---------SPSSHKDELMFDLSLNFTQQNPPVPELGNPNSGNLSL-----S 335

  Fly   480 LLGKPLNEPVFDSEDNIVNDANLHSASH-QIPPY-VPDSHDCFAED 523
            |:.|.|:.   .||.::        .|| ..|.| .|:..:..|.|
 Frog   336 LVDKDLDS---CSEGSL--------GSHFDFPDYCTPELSEMIAGD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 47/70 (67%)
sox11NP_001008053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 5/10 (50%)
SOX-TCF_HMG-box 47..118 CDD:238684 47/70 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..174 22/73 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..231 5/33 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I6481
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4479
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - otm47756
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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