DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox14 and Sox100B

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:431 Identity:117/431 - (27%)
Similarity:177/431 - (41%) Gaps:77/431 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 MDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNA 215
            ::|.|.:||..||:.|          |..||.   ||||||||||||:|..||.:.::.|.|.|:
  Fly    54 LEGYDWNLVQASAKAP----------TDRKKE---HIKRPMNAFMVWAQAARRVMSKQYPHLQNS 105

  Fly   216 EISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTR-----------SPGSL 269
            |:||.||:.|:.|...||:|::..|||||..|..|:|:|||:|::|:.|           |||  
  Fly   106 ELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQSGEGGSPG-- 168

  Fly   270 KPNQDADGCEARNDTTNNNNSLTTLAINGTTTAGR-KSKRSTSTCQSGSASKRLRNDSGDTSSKP 333
             |..........:....::||      ||...||: .:.....:|.|..:...:.::|.|..|..
  Fly   169 -PEMTLSATMGSSGKPRSSNS------NGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSNE 226

  Fly   334 KYEVKMES--AEQLNSADIILPSADNLISYQS--SEYLPLSTLSNADCDEKLHSELSSGPLESRE 394
            .:...:.|  |..|....:|....|:..|..|  |...|.:|..|. ......:..::.|.....
  Fly   227 AFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPYNV-APSNAKASAANNPSLLLR 290

  Fly   395 NLSEVV----NRFLPLFLGGNEDSQLG-VSSLTQSQHNQSDPTAG-------LMDNI-------- 439
            .|||.|    :.:..|...|.|...:| |:...||...||....|       .::||        
  Fly   291 QLSEPVANAGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTG 355

  Fly   440 SDIS------PINDREELTEEVMRYLPYLEVNPSSDGLTLKVESSSLLGKPLNEPVFDSEDNIVN 498
            |.:|      |.|.....|||..:.    :...:|:.|..|..::.:..|.:::...|....:..
  Fly   356 SRVSYPAYSYPANGGHFATEEQQQQ----QALQASEALNYKPAAADIDPKEIDQYFMDQMLPMTQ 416

  Fly   499 DAN------LHSASHQIPPYVPDSHDCFAEDCGGDSSSHQV 533
            ..:      ||...|..||.  :|....:..|...||...|
  Fly   417 HHHPHHTHPLHHPLHHSPPL--NSSASLSSACSSASSQQPV 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 38/70 (54%)
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 37/69 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451317
Domainoid 1 1.000 49 1.000 Domainoid score I4418
eggNOG 1 0.900 - - E1_KOG0527
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.740

Return to query results.
Submit another query.