DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and Sry

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_035694.1 Gene:Sry / 21674 MGIID:98660 Length:395 Species:Mus musculus


Alignment Length:89 Identity:45/89 - (50%)
Similarity:67/89 - (75%) Gaps:2/89 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 GHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMI 249
            ||:|||||||||||:.||.|:.::.|.:.|.||||:||.||:.|::.:|:|:..||::|:.||..
Mouse     3 GHVKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKILHRE 67

  Fly   250 EYPNYKYRPQK--KQTRSPGSLKP 271
            :||||||:|.:  |.::..|.|:|
Mouse    68 KYPNYKYQPHRRAKVSQRSGILQP 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 38/70 (54%)
SryNP_035694.1 Sufficient for interaction with KPNB1. /evidence=ECO:0000250|UniProtKB:Q05066 4..81 40/76 (53%)
SOX-TCF_HMG-box 4..74 CDD:238684 37/69 (54%)
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q05066 6..22 13/15 (87%)
Sufficient for interaction with EP300. /evidence=ECO:0000250|UniProtKB:Q05066 52..84 14/31 (45%)
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q05066 75..81 1/5 (20%)
Necessary for interaction with ZNF208 isoform KRAB-O. /evidence=ECO:0000269|PubMed:15469996 92..144 45/89 (51%)
Necessary for interaction with SLC9A3R2 and nuclear accumulation of SLC9A3R2. /evidence=ECO:0000269|PubMed:16166090 94..138
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..361
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838580
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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