DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and Sox9

DIOPT Version :10

Sequence 1:NP_476894.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_035578.3 Gene:Sox9 / 20682 MGIID:98371 Length:507 Species:Mus musculus


Alignment Length:637 Identity:133/637 - (20%)
Similarity:215/637 - (33%) Gaps:237/637 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPPF-----------SPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAAAPKTP 106
            |.||           |.:|||..|...|.:..|....:.::           .:.|.....||  
Mouse     4 LDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTE-----------NTRPQENTFPK-- 55

  Fly   107 KTPEPRSTHTHTHTHSQHFSPPPRESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSST 171
                               ..|..:.|.:.::.|......::..:.|.|.:||  ...|.||.|:
Mouse    56 -------------------GEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLV--PMPVRVNGSS 99

  Fly   172 PYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPY 236
                     |:.| |:||||||||||:|..|||:.::.|.|||||:||.||:.|:||::.:|:|:
Mouse   100 ---------KNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPF 154

  Fly   237 IIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNNNSLTTLAINGTTT 301
            :.|||:||..|..::|:|||:|::::     |:| |..|:..||...|..:.|::          
Mouse   155 VEEAERLRVQHKKDHPDYKYQPRRRK-----SVK-NGQAEAEEATEQTHISPNAI---------- 203

  Fly   302 AGRKSKRSTSTCQSGSASKRLRNDSGDTSSKPKYEVKMESAEQLNSADIILPSADNLISYQSSEY 366
                             .|.|:.||..:||              ..:::..|..           
Mouse   204 -----------------FKALQADSPHSSS--------------GMSEVHSPGE----------- 226

  Fly   367 LPLSTLSNADCDEKLHSELSSGP--------LESRENLSEVVNRFLPLFLGGNE------DSQLG 417
                           ||..|.||        .:.:....::.....||..||.:      |..:|
Mouse   227 ---------------HSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVDIG 276

  Fly   418 VSSLTQSQHNQSDPTAGLMDNISDISPINDREELTEEVMRYLPYLEVN-----PSSDGLTLKVES 477
            ..|               .|.||:|.        |.:|..:..||..|     |::.|......|
Mouse   277 ELS---------------SDVISNIE--------TFDVNEFDQYLPPNGHPGVPATHGQVTYTGS 318

  Fly   478 ---SSLLGKPLNEPVFDSEDNIVNDANLHSASHQIPPYVPDSHDCFAEDCGGDSSSHQVEFEVVR 539
               ||....|            ....::..:..|.||..|..                       
Mouse   319 YGISSTAPTP------------ATAGHVWMSKQQAPPPPPQQ----------------------- 348

  Fly   540 PQTVTMTMTCTLPYGGPDAGHTTFQADDFNAIPSAAEDSECSILTTSNSPQIGFNGSSFVEADAI 604
                        |...|.|.....|.......|.|.:..:...|||.:| :.|.:..:.::.:.:
Mouse   349 ------------PPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSS-EPGQSQRTHIKTEQL 400

  Fly   605 GSTCTYAQQDYTGSVIE----------------THNDLNYAAHDNNGALLAY 640
            ..:....||.::...|.                |.:..:||.|.|:|:..::
Mouse   401 SPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYYSH 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_476894.1 HMG-box_SoxC 186..261 CDD:438838 41/74 (55%)
Sox9NP_035578.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 15/94 (16%)
Sox_N 22..94 CDD:463586 16/105 (15%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 63..103 11/50 (22%)
PQA. /evidence=ECO:0000250|UniProtKB:P48436 63..103 11/50 (22%)
HMG-box_SoxE 104..178 CDD:438840 41/73 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..250 28/162 (17%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 224..307 22/131 (17%)
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 275..284 3/23 (13%)
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 290..298 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..429 18/129 (14%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 392..507 9/61 (15%)
9aaTAD 3. /evidence=ECO:0000250|UniProtKB:P48436 458..466
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..507
Blue background indicates that the domain is not in the aligned region.

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