DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and Sox4

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_033264.2 Gene:Sox4 / 20677 MGIID:98366 Length:440 Species:Mus musculus


Alignment Length:546 Identity:141/546 - (25%)
Similarity:202/546 - (36%) Gaps:165/546 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 ESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFM 195
            |:.:.||.|.|.:|.|:     ||.||...||..    |:...:|.....|...|||||||||||
Mouse    12 EALLAGESSDSGAGLEL-----GIASSPTPGSTA----STGGKADDPSWCKTPSGHIKRPMNAFM 67

  Fly   196 VWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQK 260
            ||||:|||||.|::||:|||||||.||:||:||...||.|:|.|||:||..||.:||:|||||:|
Mouse    68 VWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADYPDYKYRPRK 132

  Fly   261 K------QTRSPGSLKPNQDADGCEARNDTTNNNNSLTTLAINGTTTAGRKSKRSTSTCQSGSAS 319
            |      ...|..:.||.:..|.....:...            |::.||..:..|:......|..
Mouse   133 KVKSGNAGAGSAATAKPGEKGDKVAGSSGHA------------GSSHAGGGAGGSSKPAPKKSCG 185

  Fly   320 KRLRNDSGDTSSKPKYEVKMESAEQLNSADIILPSADNLISYQSSEYLPLSTLSNADCDEKLHSE 384
            .::   :|.:..||             .|.::........:..|.|...|..|.......|:.:.
Mouse   186 PKV---AGSSVGKP-------------HAKLVPAGGSKAAASFSPEQAALLPLGEPTAVYKVRTP 234

  Fly   385 LSSGPLESRENLSEVV--------NRFLPLFLGGNEDSQLGVSSLTQSQHNQSDPTAGLMDNISD 441
            .::.|..|....|.:.        .:...::|.|:    ||.|         :.|..||..:...
Mouse   235 SAATPAASSSPSSALATPAKHPADKKVKRVYLFGS----LGAS---------ASPVGGLGASADP 286

  Fly   442 ISPINDREELTEEVMRYLPYLEVNP--SSDGLTLKVESSSLLGKPLNEPVFDSEDNIVNDANLHS 504
            ..|:.             .|.:..|  |.||.:|...||:......:....|..    ..|:|.:
Mouse   287 SDPLG-------------LYEDGGPGCSPDGRSLSGRSSAASSPAASRSPADHR----GYASLRA 334

  Fly   505 AS---HQIPPYVPDSHDCFAEDCGGDSSSHQVEFEVVRPQTVTMTMTCTLPYGGPDAGHTTFQAD 566
            ||   ...|.:...|....:....|.|||.. |||                             |
Mouse   335 ASPAPSSAPSHASSSLSSSSSSSSGSSSSDD-EFE-----------------------------D 369

  Fly   567 DFNAIPSAAEDSECSILTTSNSPQIGFNGSSFVEADAIGSTCTYAQQDYTGSVIETHNDLNYAAH 631
            |.                      :..|.||..|:.::||..       :.|.::...|.|:   
Mouse   370 DL----------------------LDLNPSSNFESMSLGSFS-------SSSALDRDLDFNF--- 402

  Fly   632 DNNGALLAYTFEDLPPQP-TGSHLEF 656
                            :| :|||.||
Mouse   403 ----------------EPGSGSHFEF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 50/70 (71%)
Sox4NP_033264.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 16/54 (30%)
SOX-TCF_HMG-box 58..129 CDD:238684 50/70 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..211 18/110 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..258 3/23 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..382 32/187 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838604
Domainoid 1 1.000 109 1.000 Domainoid score I6352
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - otm42653
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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