DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and Sox11

DIOPT Version :10

Sequence 1:NP_476894.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_033260.4 Gene:Sox11 / 20666 MGIID:98359 Length:395 Species:Mus musculus


Alignment Length:430 Identity:125/430 - (29%)
Similarity:178/430 - (41%) Gaps:120/430 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 EMTLSMDGIDS--SLVFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICER 208
            |..|..|.:|:  ......:.|.::.|.|  |..:|   :.||||||||||||||::|||||.|:
Mouse    11 ESNLPRDALDTEEGEFMACSPVALDESDP--DWCKT---ASGHIKRPMNAFMVWSKIERRKIMEQ 70

  Fly   209 TPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGS----- 268
            :||:|||||||.||:||::|...:|.|:|.|||:||..||.:||:|||||:||....|.:     
Mouse    71 SPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKTDPAAKPSAG 135

  Fly   269 LKPNQDADGCEARNDTTNNNNSLTTLAINGTTTAGRKSKRSTSTCQSGSASKRLRNDSGDTSSKP 333
            ..|::.|.|.:|..........|...|  |...||:.::  ...|.:|.|:|.:..|..|.....
Mouse   136 QSPDKSAAGAKAAKGPGKKCAKLKAPA--GKAGAGKAAQ--PGDCAAGKAAKCVFLDDDDEDDDE 196

  Fly   334 KYEVKMESAEQLNSADIILPSADNLISYQSSEYLPLSTLSNADCDEKLHSELSSGPLESRENLSE 398
            ..|:::...          |.||:                  |.||..||.|...|  :::...:
Mouse   197 DDELQLRPK----------PDADD------------------DDDEPAHSHLLPPP--TQQQPPQ 231

  Fly   399 VVNRF----LPLFLGGNEDSQLGVSSLTQSQHNQSDPTAGLMD-------------NISD----- 441
            ::.|:    :|             :|.|.|...:|...|.|.|             ||:.     
Mouse   232 LLRRYSVAKVP-------------ASPTLSSAAESPEGASLYDEVRAGGRLYYSFKNITKQQPPP 283

  Fly   442 ----ISPINDREELTEEVMRYLPYLEVNPSSDGLTLKVESSSLLGKPLNEPVFDSEDNIVNDANL 502
                :||.:.|...|.             ||.|     .||....:..::.:||...|....|  
Mouse   284 APPALSPASSRCVSTS-------------SSSG-----SSSGSGAEDADDLMFDLSLNFSQGA-- 328

  Fly   503 HSASHQIP-----------PYVPDSHDCFAEDCGGDSSSH 531
            |||..| |           ..|....|.|:|   |...||
Mouse   329 HSACEQ-PLGAGAAGNLSLSLVDKDLDSFSE---GSLGSH 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_476894.1 HMG-box_SoxC 186..261 CDD:438838 50/74 (68%)
Sox11NP_033260.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 4/10 (40%)
HMG-box_SoxC_SOX11 38..129 CDD:438846 56/95 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..258 41/190 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..312 10/53 (19%)
Required for transcriptional activation activity and synergistic coactivation of transcriptional activity with POU3F2. /evidence=ECO:0000269|PubMed:18403418 363..395 2/2 (100%)

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