DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and Y65B4A.7

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_490764.1 Gene:Y65B4A.7 / 190486 WormBaseID:WBGene00022030 Length:156 Species:Caenorhabditis elegans


Alignment Length:23 Identity:8/23 - (34%)
Similarity:14/23 - (60%) Gaps:1/23 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 GSTCTYAQQD-YTGSVIETHNDL 626
            |.|.|..:|: .||.||:..:::
 Worm    23 GCTTTLTRQEAQTGKVIKIQDEM 45

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684
Y65B4A.7NP_490764.1 LIM_DA1 90..141 CDD:188782
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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