DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and sox10

DIOPT Version :10

Sequence 1:NP_476894.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_571950.1 Gene:sox10 / 140616 ZFINID:ZDB-GENE-011207-1 Length:485 Species:Danio rerio


Alignment Length:632 Identity:139/632 - (21%)
Similarity:223/632 - (35%) Gaps:222/632 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 APKADSTPHTLPPFSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAAAPKTPK 107
            :|......|::.|...|.:|..:.||.|.|       |||.     :.:....|.|:.....   
Zfish    14 SPGVSDDGHSMSPGHSSGAPGGADSPLPGQ-------QSQM-----SGIGDDGAGVSGGVSV--- 63

  Fly   108 TPEPRSTHTHTHTHSQHFSPPPRESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSSTP 172
                                   :|:.:.:|.|......::..::|.|.:||  ...|.|||.: 
Zfish    64 -----------------------KSDEEDDRFPIGIREAVSQVLNGYDWTLV--PMPVRVNSGS- 102

  Fly   173 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYI 237
                    |..| |:||||||||||:|..|||:.::.|.|||||:||.||:.|:||::.||:|:|
Zfish   103 --------KSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNETDKRPFI 158

  Fly   238 IEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNNNSLTTLAINGTTTA 302
            .|||:|||.|..:||.|||:|::::...|||   :.:|| ..:..:.:::.:...:|.:      
Zfish   159 EEAERLRKQHKKDYPEYKYQPRRRKNGKPGS---SSEAD-AHSEGEVSHSQSHYKSLHL------ 213

  Fly   303 GRKSKRSTSTCQSGSASKRLRND-----SGDTSS------KPKYEV--------KMESAEQLNSA 348
                    .....|:|...|.:.     :|.:.|      .||.|:        |.|.....:..
Zfish   214 --------EVAHGGAAGSPLGDGHHPHATGQSHSPPTPPTTPKTELQGGKSGEGKREGGASRSGL 270

  Fly   349 DIILPSADNLISYQSSEYLPLSTLSNADCDEKLHSELSS-GPLESRENLSEVVNRFLPLFLGGNE 412
            .:   .||...:..|:...|.....|.|..|..|..::: .|.:..|     .:::||       
Zfish   271 GV---GADGSSASSSASGKPHIDFGNVDIGEISHDVMANMEPFDVNE-----FDQYLP------- 320

  Fly   413 DSQLGVSSLTQSQHNQSDPTAGLMDNISDISPINDREELTEEVMRYLPYLEVNPSSDGLTLKVES 477
                      .:.|.|:..||                             ....::...|..: |
Zfish   321 ----------PNGHPQASATA-----------------------------SAGSAAPSYTYGI-S 345

  Fly   478 SSLLGKPLNEPVFDSEDNIVNDANLHSASHQIPPYVPDSHDCFAEDCGGDSSSHQVEFEVVRP-- 540
            |:|..                 |:.||.:......:|..     :..|.|....|::.|...|  
Zfish   346 SALAA-----------------ASGHSTAWLSKQQLPSQ-----QHLGADGGKTQIKSETHFPGD 388

  Fly   541 -----QTVTMTMTCTLPYGGPDAGHTTFQADDFNAIPSAAEDSECSILTTSNSPQIGFNGSSFVE 600
                 ..||.| ..|||:..             :|.||.|..::                  |.|
Zfish   389 TAASGSHVTYT-PLTLPHYS-------------SAFPSLASRAQ------------------FAE 421

  Fly   601 ADAIGSTCTYAQQDYTGSVIETHNDLNYAAHDNNGALLAYTFEDLPP 647
                     ||:...:||         |.||.:..:.|...|..:.|
Zfish   422 ---------YAEHQASGS---------YYAHSSQTSGLYSAFSYMGP 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_476894.1 HMG-box_SoxC 186..261 CDD:438838 45/74 (61%)
sox10NP_571950.1 Sox_N 13..97 CDD:463586 21/122 (17%)
HMG-box_SoxE 107..181 CDD:438840 45/73 (62%)

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