DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and cfap65

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_002663368.2 Gene:cfap65 / 100333283 ZFINID:ZDB-GENE-081104-83 Length:1780 Species:Danio rerio


Alignment Length:352 Identity:71/352 - (20%)
Similarity:106/352 - (30%) Gaps:112/352 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TLPPFSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAAAPKTPKTPEPRSTH- 115
            ||||...|....|..:..|::.       .|.|..|          ......:.|:.|.|...| 
Zfish  1482 TLPPIRSSDQAVSCATAKPSRA-------EQRARQH----------TGQERRRRPELPRPALLHL 1529

  Fly   116 -----------------THTHTHSQHFSPPPRESEM--------DGERSPSHSGHE---MTLSMD 152
                             ||.:||..:.|..|::|..        ..|.:|...|||   :|..:.
Zfish  1530 GVTARSHSLLEYQTHFPTHFNTHYINRSRQPKDSSSGTAESFYHPSELTPLGPGHERDIVTHLLT 1594

  Fly   153 GIDSSLV----FGSARVPVN-SSTPYSD--------ATRTKKHSPG----HIKRPMNAFMVWSQM 200
            .:..||:    |....:..: ...||..        .|:|:.||..    |::        .|.:
Zfish  1595 SLLQSLLDEPQFQQCLLEGDIEQVPYFTQLRPAPVLPTKTQPHSSSDSQDHVQ--------MSSV 1651

  Fly   201 ERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRS 265
            ....:.|..|...|.               .|:.....|.|.|.:|.    ...|.:.|:...|.
Zfish  1652 SNAALAETHPGHCNT---------------GDRPKTDYEQEALTELQ----EEIKIKAQESIRRL 1697

  Fly   266 PGSLKPNQDADGCEARND-TTNNNNSLTTLAING---TTTAGR-------KSKRST--STCQSGS 317
            |         :.|:...| ..|...:|...|..|   .||..|       .|:||:  |..||.:
Zfish  1698 P---------EFCDLLEDILLNTLQNLMMEAFLGELVLTTRPRIIALPPTSSRRSSFGSNKQSSA 1753

  Fly   318 ASKRLRNDSGDTSSKPKYEVKMESAEQ 344
            .||:.:.......:.|...|.....||
Zfish  1754 ESKKSKQQMRPLLTSPTPRVSDLKPEQ 1780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 11/70 (16%)
cfap65XP_002663368.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582368
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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