DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and sox15

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001120046.1 Gene:sox15 / 100145022 XenbaseID:XB-GENE-6455809 Length:199 Species:Xenopus tropicalis


Alignment Length:120 Identity:47/120 - (39%)
Similarity:65/120 - (54%) Gaps:30/120 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 HSPGH---------------IKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKD 231
            |.|.|               :|||||||||||..||:::..|.|.:||:|||:.||..|:.|.:|
 Frog     2 HPPQHSAPPAPPAPPNESPLVKRPMNAFMVWSSGERKRMSARHPKMHNSEISRRLGEIWRGLGED 66

  Fly   232 DKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTR---------------SPGSLKP 271
            :::|:..||::||..|.|:||.|||.|:||:..               .|||..|
 Frog    67 ERRPFREEAKRLRAQHAIDYPGYKYAPRKKRKERGEPPKVAPQAPLPCPPGSSPP 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 37/85 (44%)
sox15NP_001120046.1 SOX-TCF_HMG-box 22..91 CDD:238684 35/68 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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