DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and sox6

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_031755685.1 Gene:sox6 / 100144640 XenbaseID:XB-GENE-483934 Length:804 Species:Xenopus tropicalis


Alignment Length:470 Identity:122/470 - (25%)
Similarity:183/470 - (38%) Gaps:126/470 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSLRPGT-VPTV--PATTPA--RPATITIQRRHPAPKA------------DSTPHTLPPFSPSPS 61
            :.:.||. :||.  ||..|.  .|..:..::|..:|.|            .:.|.|..|.....|
 Frog   364 MQVSPGAKIPTTPQPANAPGTLSPTGMKSEKRGTSPVAQIKDEAAQPLNLSARPKTADPIKSPTS 428

  Fly    62 PASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAA-------------------APK--- 104
            |..|..|....:|.:...:|..    |:.:..||..:.::                   |.|   
 Frog   429 PTQSFFPVSKTSPVSLSNKSGI----PSPIRGPSLDILSSLNSPALFGDQDTVMKAIQEARKMRE 489

  Fly   105 --------TPKTPEP----------------------------RSTHTHTHTHSQHFSP----PP 129
                    ||.:.:.                            ||.||. .||.::..|    .|
 Frog   490 QIQREQLLTPHSIDGKLPINNMGLNNCRSDKMLLDAVTGKICIRSAHTE-RTHFENLGPQLTGKP 553

  Fly   130 RESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAF 194
            .|   ||:..|...  ::|...| ::.......|||       |.| ||.:..|..|||||||||
 Frog   554 NE---DGKLGPGVI--DLTRPED-VEGGATVVEARV-------YRD-TRGRSSSEPHIKRPMNAF 604

  Fly   195 MVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQ 259
            |||::.|||||.:..||:||:.|||.||.||:.:|..:||||..|..:|.|:|:.:||||||:|:
 Frog   605 MVWAKDERRKILQAFPDMHNSNISKILGSRWKAMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPR 669

  Fly   260 KKQT-------RSPGSLKPNQDADGCEARN-DTTNNNNSLTTLAINGTTTAGRKSKRSTSTCQSG 316
            .|:|       ...|..|....:...|.|. .|......:......|....|..|..:|      
 Frog   670 PKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPISTPTGVVYPGTISMATT------ 728

  Fly   317 SASKRLRNDSGDTSSKPK---------YEVKMESAEQLNSADIILPSADNLISYQSSEYLPLSTL 372
            :.|.::.:|...||:.|:         |.:|::|. .|...| ::...|.:..|...|..|.|..
 Frog   729 TPSPQMTSDCSSTSASPEPSIPVIQSTYGMKLDSG-SLGGND-LMNGEDEMEMYDDFEDDPKSDY 791

  Fly   373 SNADCDEKLHSELSS 387
            |:   |.:.:..:|:
 Frog   792 SS---DNEANEAVSA 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 42/70 (60%)
sox6XP_031755685.1 SOX-TCF_HMG-box 596..667 CDD:238684 42/70 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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