DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox14 and sox10

DIOPT Version :9

Sequence 1:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001093691.1 Gene:sox10 / 100101700 XenbaseID:XB-GENE-480304 Length:436 Species:Xenopus tropicalis


Alignment Length:465 Identity:119/465 - (25%)
Similarity:193/465 - (41%) Gaps:98/465 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 APVAAAAPKTPKTPEPRSTHTHTHTHSQHFSPPPRESEMDGERSPSHSGHEMTLSMDGIDSSLVF 160
            :||.:..|..  ||:|...|.|:.......:...:|.:.:.||.|......::..:.|.|.:||.
 Frog    13 SPVGSEDPSL--TPDPLPPHAHSSPDDDEETKVKKEQDSEDERFPVCIREAVSQVLSGYDWTLVP 75

  Fly   161 GSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRW 225
            ...||...|           |..| |:||||||||||:|..|||:.::.|.|||||:||.||:.|
 Frog    76 MPVRVNGGS-----------KSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLW 128

  Fly   226 QLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQT--RSPGSLKPNQDADGCEARNDTTNNN 288
            :||:::||:|:|.|||:||..|..::|:|||:|::::.  .:||....:.:|:|..|.......|
 Frog   129 RLLNENDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKPNPGEGDGSSEAEGGAASIQAHYKN 193

  Fly   289 NSLTTLAINGTTTAGRKSKRSTSTCQSGSASKRLRNDSGDTS--SKPKYEVKMESAEQLNSADII 351
            :.|              ..|..|....|::........|..:  :.||.|::...::........
 Frog   194 SHL--------------DHRHGSPMSDGNSEHSAGQSHGPPTPPTTPKTELQAGKSDGKRDGSRS 244

  Fly   352 LPSADNLISYQSSEYLPLSTLSNADCDEKLHSELSSGPLESRENLSEVVNRF-----------LP 405
            |.....          |.....|.|..|..|..:::  :|:.:     ||.|           .|
 Frog   245 LGEGGK----------PHIDFGNVDIGEISHDVMAN--METFD-----VNEFDQYLPPNGHAGHP 292

  Fly   406 LFLGGNEDSQLGVSSLTQS---------QHNQSDPTAGLMDNISDISPINDREELTEEVMRY--- 458
            ..:|| ..|..|:|....:         ||.|:|..|.:....|..|...::...::  :.|   
 Frog   293 SHIGG-YTSSYGLSGALAAGPSAWALAKQHPQTDSKAQVKTESSSTSHYTEQPSTSQ--LTYTSL 354

  Fly   459 -LP---------------YLEVNPSSDGLTLKVESSSL------LGKPLNEPVFDSEDNIVNDAN 501
             ||               |.:..|||...:...::|||      :|.| ..|::.:..:..:.|.
 Frog   355 GLPHYGSAFPSISRPQFDYADHQPSSSYYSHSSQASSLYSAFSYMGPP-QRPLYTAISDSPSVAQ 418

  Fly   502 LHSASHQIPP 511
            .||.:|...|
 Frog   419 SHSPTHWEQP 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 41/70 (59%)
sox10NP_001093691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 11/43 (26%)
Sox_N 12..79 CDD:372113 16/67 (24%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P56693 48..88 11/50 (22%)
SOX-TCF_HMG-box 89..159 CDD:238684 40/69 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..183 11/37 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..257 10/85 (12%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P56693 209..295 15/102 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..346 5/23 (22%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P56693 327..436 21/105 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..436 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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