DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PPP1R15 and Ppp1r15a

DIOPT Version :9

Sequence 1:NP_611863.1 Gene:PPP1R15 / 37820 FlyBaseID:FBgn0034948 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_598230.2 Gene:Ppp1r15a / 171071 RGDID:621526 Length:578 Species:Rattus norvegicus


Alignment Length:280 Identity:64/280 - (22%)
Similarity:92/280 - (32%) Gaps:90/280 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 HKCVNAQSPPGAKMAGIELDALRRCVPSSCYFFIDLHPHHGFKDT--AEDCPTSQASSDRNNNAG 167
            |.|.||::..|.....:       |..|:   |:....:...:||  .||.....|..|..:...
  Rat   259 HPCQNAEAEEGGPETSV-------CSGSA---FLKAWVYRPGEDTEEEEDSDLDSAEEDTAHTCT 313

  Fly   168 CSQGSAAKSSWQRQRSISECSEDSFICFEDDAEQADEDV---------------------EEDED 211
            ....||...:|..:.......||     :.|.:.|:||.                     |:.|:
  Rat   314 TPHTSAFLKAWVYRPGEDTEEED-----DGDWDSAEEDTAQSCTTPHTSAFLKAWVYRPGEDTEE 373

  Fly   212 DDDDDS----------SVQFT----------ACGEDE---------------------------- 228
            :||.::          |.|.|          .|||.|                            
  Rat   374 EDDSENVAPVDSETVDSCQSTQHCLPVEKTKGCGEAEPPPFQVAFYLPGQKPAPPWAAPKLPLRL 438

  Fly   229 --NTEELKACQCSDDSSTPVK--KVRFNMKPEVHVMLAWDYAYRAARKSEWQVMARDRDRFQQRI 289
              .....||...:.|...|:|  ||.|:.|..||.:..|....:|||:..|:..||||.||.:||
  Rat   439 QKRLRSFKAPARNQDPEIPLKGRKVHFSEKVTVHFLAVWAGPAQAARRGPWEQFARDRSRFARRI 503

  Fly   290 RRISPILNAVLTPVHRDRVY 309
            .:....|...|||..|.|.:
  Rat   504 AQAEEQLGPYLTPAFRARAW 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPP1R15NP_611863.1 PP1c_bdg <243..309 CDD:287462 27/67 (40%)
Ppp1r15aNP_598230.2 Required for localization in the endoplasmic reticulum. /evidence=ECO:0000250 1..165
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..122
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..314 14/64 (22%)
3 X approximate repeats 279..375 19/103 (18%)
Interaction with SMAD7. /evidence=ECO:0000250 319..417 19/102 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..353 6/27 (22%)
Interaction with KMT2A/MLL1. /evidence=ECO:0000250 363..462 16/98 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..393 5/24 (21%)
Interaction with SMARCB1. /evidence=ECO:0000250 443..490 15/46 (33%)
PP1c_bdg <459..526 CDD:287462 26/65 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..578
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343336
Domainoid 1 1.000 51 1.000 Domainoid score I11340
eggNOG 1 0.900 - - E1_2DZKW
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006935
OrthoInspector 1 1.000 - - oto96636
orthoMCL 1 0.900 - - OOG6_113613
Panther 1 1.100 - - LDO PTHR16489
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.830

Return to query results.
Submit another query.