DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and Sp2

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_084496.2 Gene:Sp2 / 78912 MGIID:1926162 Length:613 Species:Mus musculus


Alignment Length:244 Identity:78/244 - (31%)
Similarity:111/244 - (45%) Gaps:59/244 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VIPNTPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASDMILR--------------------- 47
            ::.::|.....|||| :....|....|.:||.:  ::.|..|||                     
Mouse   367 LVQDSPPATAATTST-VTCNSPALRAPHLSGTS--KKHSAAILRKERPLPKIAPAGSIISLNAAQ 428

  Fly    48 ---ASTIFEDVKHDEANVENVPHHGVETEPEDD---SHYGGNGNSKIRIMPS-VKL-MATTLASD 104
               |:...:.:..:...|:.||.....|..:..   .:..||..:...:.|: ::| |...||.:
Mouse   429 LAAAAQAMQTININGVQVQGVPVTITNTGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGE 493

  Fly   105 P---------------------------KRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCS 142
            .                           |:|.||...:|.|::.|:|.||:|:..|||.:||||:
Mouse   494 AQPGEKRRRMACTCPNCKDGEKRSGEQGKKKHVCHIPDCGKTFRKTSLLRAHVRLHTGERPFVCN 558

  Fly   143 EPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATH 191
            ...|||.|||||||.||.|||||:|.|||.||.|:|.||||||||..||
Mouse   559 WFFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTH 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 55/120 (46%)
C2H2 Zn finger 111..133 CDD:275368 8/21 (38%)
C2H2 Zn finger 141..163 CDD:275368 14/21 (67%)
C2H2 Zn finger 171..191 CDD:275368 13/19 (68%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Sp2NP_084496.2 SP2_N 10..526 CDD:411776 27/161 (17%)
C2H2 Zn finger 530..549 CDD:275368 7/18 (39%)
zf-H2C2_2 542..568 CDD:463886 14/25 (56%)
C2H2 Zn finger 557..579 CDD:275368 14/21 (67%)
zf-H2C2_2 571..594 CDD:463886 16/22 (73%)
zf-C2H2 585..607 CDD:395048 15/21 (71%)
C2H2 Zn finger 587..607 CDD:275368 13/19 (68%)
Blue background indicates that the domain is not in the aligned region.

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