DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3065 and klf13

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001070240.1 Gene:klf13 / 767805 ZFINID:ZDB-GENE-060929-1274 Length:258 Species:Danio rerio


Alignment Length:260 Identity:84/260 - (32%)
Similarity:107/260 - (41%) Gaps:65/260 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQVIPNTPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASD--MILRASTIFEDVKH------- 57
            ||.|.:.|.....|        ||..|....:|....|...|  .:...:.|..|...       
Zfish    14 SQAIVHGPKGNRET--------KPETAAAQRNGEEAKEPLKDNSSLFVVARILADFNQQTPASFA 70

  Fly    58 DEANVENVPHHGVETEPEDDSHYGGNGNSKIRIMPSVKLMATTLASD------------------ 104
            ::|.::.      |:.|...:..|.:|||         ...|.:..|                  
Zfish    71 EQAKIKE------ESTPPTATPSGDDGNS---------ATPTAIPGDSALKQRGKRFRGRVEHDA 120

  Fly   105 PKRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPF 169
            |::|..|.|..|.|.|||||||::||..|||.:||.|:.|.|.|.|.|||||.||.|||||||.|
Zfish   121 PQKKHKCHYSGCEKVYGKSSHLKAHLRTHTGERPFPCTWPDCSKKFARSDELARHYRTHTGEKKF 185

  Fly   170 ECIQCTKKFSRSDHLTKHLATHD--------RQLKGSTPKRTVPSSSGGVRLKPPKKQIHSESDS 226
            .|..|.|:|.|||||.||...|.        ||..|.   ....|||    ::|.....:|.||:
Zfish   186 GCPLCDKRFMRSDHLMKHARRHSDFQPAMLKRQHGGG---NAAVSSS----MRPGSLSDYSRSDA 243

  Fly   227  226
            Zfish   244  243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 64/154 (42%)
C2H2 Zn finger 111..133 CDD:275368 13/21 (62%)
C2H2 Zn finger 141..163 CDD:275368 13/21 (62%)
C2H2 Zn finger 171..191 CDD:275368 11/19 (58%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
klf13NP_001070240.1 KLF13_N 1..126 CDD:409236 24/134 (18%)
C2H2 Zn finger 127..149 CDD:275368 13/21 (62%)
zf-H2C2_2 141..168 CDD:463886 14/26 (54%)
COG5048 <156..249 CDD:227381 42/95 (44%)
C2H2 Zn finger 157..179 CDD:275368 13/21 (62%)
zf-H2C2_2 171..194 CDD:463886 15/22 (68%)
C2H2 Zn finger 187..207 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.