DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and Klf6

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_113830.2 Gene:Klf6 / 58954 RGDID:62389 Length:317 Species:Rattus norvegicus


Alignment Length:141 Identity:59/141 - (41%)
Similarity:75/141 - (53%) Gaps:9/141 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ANVENVPHHGVETEPEDDSHYG-GNGN----SKIRIMPSVKL--MATTLASDPKRKFV--CPYDN 115
            ::|.:.|....|...|....:| |.|:    .|:|...|.|.  ..:..||...|:.|  |.::.
  Rat   176 SSVISTPPSSPEVNRESSQLWGCGPGDLPSPGKVRSGTSGKSGDKGSGDASPDGRRRVHRCHFNG 240

  Fly   116 CTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSR 180
            |.|.|.|||||::|...|||.||:.||...|...|.|||||.||.|.|||.|||:|..|.:.|||
  Rat   241 CRKVYTKSSHLKAHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFSR 305

  Fly   181 SDHLTKHLATH 191
            ||||..|:..|
  Rat   306 SDHLALHMKRH 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 48/95 (51%)
C2H2 Zn finger 111..133 CDD:275368 10/21 (48%)
C2H2 Zn finger 141..163 CDD:275368 12/21 (57%)
C2H2 Zn finger 171..191 CDD:275368 10/19 (53%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Klf6NP_113830.2 KLF6_N 36..235 CDD:409245 15/58 (26%)
C2H2 Zn finger 239..258 CDD:275368 9/18 (50%)
C2H2 Zn finger 266..288 CDD:275368 12/21 (57%)
zf-H2C2_2 280..305 CDD:463886 14/24 (58%)
zf-C2H2 294..316 CDD:395048 11/21 (52%)
C2H2 Zn finger 296..316 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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