DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and sp2

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001093452.3 Gene:sp2 / 556835 ZFINID:ZDB-GENE-080410-1 Length:608 Species:Danio rerio


Alignment Length:231 Identity:76/231 - (32%)
Similarity:103/231 - (44%) Gaps:55/231 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NTPTPQMLT--TSTPIEPMKPPPAFPTMSGANIHEQASDMILRASTIFEDVKHDEANVENVPHHG 69
            :||||.::|  ..|.....:..|......|..|...|:.:...|..:      ...|:..|...|
Zfish   381 STPTPAVVTKKVQTGTRKERTLPKIAPAGGGLITLNAAQLASAAQAV------QTININGVQVQG 439

  Fly    70 VETEPEDDSHYGGNGNSKIRIMPSVKL-------------------MATTLASDP---------- 105
            |   |...::.||..:..::.:||..|                   :|..|.:.|          
Zfish   440 V---PVTITNAGGQQHLTVQTVPSAGLQLGSVQTQTQTMQIEQTQTLALELQTQPGEKKRRMACT 501

  Fly   106 ---------------KRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDE 155
                           |||.:|....|.|::.|:|.||:|:..|||.:||||:...|||.||||||
Zfish   502 CPNCKDAEKKPGEVGKRKHICHIAGCEKTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDE 566

  Fly   156 LNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATH 191
            |.||.|||||:|.|||.:|.|:|.||||||||..||
Zfish   567 LQRHARTHTGDKRFECNKCQKRFMRSDHLTKHYKTH 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 54/118 (46%)
C2H2 Zn finger 111..133 CDD:275368 8/21 (38%)
C2H2 Zn finger 141..163 CDD:275368 14/21 (67%)
C2H2 Zn finger 171..191 CDD:275368 12/19 (63%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
sp2NP_001093452.3 None
Blue background indicates that the domain is not in the aligned region.

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