DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3065 and klf4

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001017280.1 Gene:klf4 / 550034 XenbaseID:XB-GENE-1015049 Length:407 Species:Xenopus tropicalis


Alignment Length:180 Identity:60/180 - (33%)
Similarity:79/180 - (43%) Gaps:38/180 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MSGANIHEQASDMILRASTIFEDVKHDEANVENVPHHGVETEPEDDSHYGGNGNSKIRIMPSVKL 96
            :.|.:.| .:|..:..:|.......|..|:..    |....:|:..             :|..:|
 Frog   245 LMGRDCH-SSSQTLSHSSLPIPPAYHTSASFS----HFTSDQPQTQ-------------LPPTQL 291

  Fly    97 MATTL---------ASDPKR-----------KFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVC 141
            ....|         .|.|||           ...|.|..|.|:|.|||||::||..|||.||:.|
 Frog   292 QYQELLTTGGCIPEESKPKRGRKSWPRKRTATHTCEYAGCGKTYTKSSHLKAHLRTHTGEKPYHC 356

  Fly   142 SEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATH 191
            ....||..|.|||||.||.|.|||.:||:|.:|.:.|||||||..|:..|
 Frog   357 DWEGCGWKFARSDELTRHYRKHTGHRPFQCQRCDRAFSRSDHLALHMKRH 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 50/113 (44%)
C2H2 Zn finger 111..133 CDD:275368 12/21 (57%)
C2H2 Zn finger 141..163 CDD:275368 12/21 (57%)
C2H2 Zn finger 171..191 CDD:275368 10/19 (53%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
klf4NP_001017280.1 KLF4_N 1..324 CDD:409228 15/96 (16%)
zf-C2H2 324..348 CDD:395048 12/23 (52%)
C2H2 Zn finger 326..348 CDD:275368 12/21 (57%)
zf-H2C2_2 340..367 CDD:463886 13/26 (50%)
C2H2 Zn finger 356..378 CDD:275368 12/21 (57%)
zf-H2C2_2 370..395 CDD:463886 13/24 (54%)
C2H2 Zn finger 386..406 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.