DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and Zfp352

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001102827.1 Gene:Zfp352 / 502968 RGDID:1563227 Length:559 Species:Rattus norvegicus


Alignment Length:222 Identity:67/222 - (30%)
Similarity:102/222 - (45%) Gaps:45/222 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASDMILRASTIFEDV---KHDEANVENVPHHG 69
            ||.....|||:..:.:...|...:.|...::...    :||| :.::|   ::..||.|.     
  Rat   344 TPHGSKRTTSSAEDNLAWHPETSSSSEETLYMGQ----MRAS-VDQNVYASQNGTANTEE----- 398

  Fly    70 VETEPEDDS------HYGGNGNSK----IRIM---------------PSVKL-MATTLASDPK-- 106
             ..|||..|      ..|.:.:|.    |||.               |.::| :.|.....|:  
  Rat   399 -SLEPEVTSLSNQAPDVGESSDSSSSPLIRIQSQGISSASGLDQGQHPQIRLDLKTQSPVSPEKP 462

  Fly   107 ---RKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKP 168
               :::.|.|..|.|||.||.||:.|:..|||.|||||.:..|...|.||.:||||.:.|:||:|
  Rat   463 PTLKRYSCTYQGCEKSYTKSHHLKDHMRKHTGEKPFVCDQIGCNWKFFRSIDLNRHKKKHSGERP 527

  Fly   169 FECIQCTKKFSRSDHLTKHLATHDRQL 195
            :.|.:|.|.:||..:|.:|..:|.:.|
  Rat   528 YACPKCNKNYSRPYYLKQHQVSHIQAL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 42/102 (41%)
C2H2 Zn finger 111..133 CDD:275368 11/21 (52%)
C2H2 Zn finger 141..163 CDD:275368 9/21 (43%)
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Zfp352NP_001102827.1 FANCI_HD2 78..>145 CDD:464259
KLF18_N 188..462 CDD:410566 27/128 (21%)
zf-C2H2 468..492 CDD:395048 11/23 (48%)
C2H2 Zn finger 470..492 CDD:275368 11/21 (52%)
zf-H2C2_2 484..>502 CDD:463886 11/17 (65%)
C2H2 Zn finger 500..522 CDD:275368 9/21 (43%)
zf-H2C2_2 514..539 CDD:463886 11/24 (46%)
C2H2 Zn finger 530..550 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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