DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and Spps

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster


Alignment Length:254 Identity:89/254 - (35%)
Similarity:118/254 - (46%) Gaps:53/254 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PNTPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASDMILRAST------IFEDVKHDEANVEN 64
            ||||     .|:.||     |.:.|..|..|....:|..|..|.|      :....:...|::.:
  Fly   618 PNTP-----ATTQPI-----PVSLPARSKVNAVTTSSTQITIAPTGGQVVSVTTQARGATASIRS 672

  Fly    65 VPHHGVETEPEDDSHY---------------GGNGNSKIRIMPSVKLMATTLA--------SDPK 106
            .............||.               ||.|.:.....|.:|.:|.|..        ||.|
  Fly   673 TNTSTTTITTPSQSHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKK 737

  Fly   107 RKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFEC 171
            |:.:|....|.|.|||:||||:||.||||.:|||||...|||.|||||||.||.|||||||.|:|
  Fly   738 RQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQC 802

  Fly   172 IQCTKKFSRSDHLTKHLATH--------------DRQLKGSTPKRTVPSSSGGVRLKPP 216
            .:|.|||.|||||:||:.||              .::.||....:::.:.:|.|.::.|
  Fly   803 QECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSISTVNGIVTIEIP 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 65/140 (46%)
C2H2 Zn finger 111..133 CDD:275368 12/21 (57%)
C2H2 Zn finger 141..163 CDD:275368 15/21 (71%)
C2H2 Zn finger 171..191 CDD:275368 12/19 (63%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 8/21 (38%)
SP1-4_N <713..741 CDD:425404 8/27 (30%)
C2H2 Zn finger 742..764 CDD:275368 12/21 (57%)
zf-H2C2_2 756..783 CDD:463886 18/26 (69%)
C2H2 Zn finger 772..794 CDD:275368 15/21 (71%)
zf-H2C2_2 786..809 CDD:463886 15/22 (68%)
zf-C2H2 800..822 CDD:395048 13/21 (62%)
C2H2 Zn finger 802..822 CDD:275368 12/19 (63%)
Blue background indicates that the domain is not in the aligned region.

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