DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3065 and sp6

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_991195.1 Gene:sp6 / 402928 ZFINID:ZDB-GENE-040426-1824 Length:278 Species:Danio rerio


Alignment Length:245 Identity:78/245 - (31%)
Similarity:110/245 - (44%) Gaps:56/245 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASDM--ILRASTIFEDVKHDEANVENVPHHGV 70
            |..|||...|.|...|..||     .|..:.....|:  :.:||..|...:..:|          
Zfish    56 TAEPQMCCLSPPGSGMHFPP-----EGFKMEPLPQDLLPLPQASASFSSEEQQDA---------- 105

  Fly    71 ETEPEDDSHYGGNGNSKIRIMPSVK------------LMATTLASD---PKRKFV--CPYDNCTK 118
                     ....|..|.:..||.:            |.|.:|.:.   .|||.:  |....|.|
Zfish   106 ---------VAAAGRPKPQRRPSSRAPGQASCRCPNCLSAESLGNSGDASKRKHLHNCHIPGCGK 161

  Fly   119 SYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDH 183
            :|.|:|||::||.||:|.:||||:...|||.|||||||.|||:||||.|.|.|..|.:.|.|:||
Zfish   162 AYVKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDELQRHLQTHTGAKRFGCSSCPRVFLRADH 226

  Fly   184 LTKHLATHD------RQLKGSTPKRTVPSSSGGVRLKPPKKQIHSESDSG 227
            |.||:..|:      .:...:....:..:||..:|:|       :|:|:|
Zfish   227 LAKHMRVHESPSQSTEETHAAAAGTSTGTSSALLRVK-------TETDNG 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 57/140 (41%)
C2H2 Zn finger 111..133 CDD:275368 10/21 (48%)
C2H2 Zn finger 141..163 CDD:275368 14/21 (67%)
C2H2 Zn finger 171..191 CDD:275368 9/19 (47%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
sp6NP_991195.1 SP6-9_N <1..153 CDD:425402 25/120 (21%)
C2H2 Zn finger 157..176 CDD:275368 9/18 (50%)
COG5048 <167..>219 CDD:227381 33/51 (65%)
C2H2 Zn finger 184..206 CDD:275368 14/21 (67%)
C2H2 Zn finger 214..234 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.