DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and CG42741

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster


Alignment Length:126 Identity:57/126 - (45%)
Similarity:69/126 - (54%) Gaps:6/126 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 TEPEDDSHYG---GNGNSKIRIMPSVKLMATTLASD-PKRKFV--CPYDNCTKSYGKSSHLRSHL 130
            |..::.|..|   |.|.|......|...||....:| .|.:.|  |..:.|.|.|.|||||::|.
  Fly   237 TRKDNSSFSGINFGGGGSAFGFTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHK 301

  Fly   131 TWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATH 191
            ..|||.||:||:...|...|.|||||.||.|.|||.|||.|..||:.|||||||:.|:..|
  Fly   302 RTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 48/96 (50%)
C2H2 Zn finger 111..133 CDD:275368 10/21 (48%)
C2H2 Zn finger 141..163 CDD:275368 11/21 (52%)
C2H2 Zn finger 171..191 CDD:275368 11/19 (58%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 40/78 (51%)
C2H2 Zn finger 282..304 CDD:275368 10/21 (48%)
C2H2 Zn finger 312..334 CDD:275368 11/21 (52%)
zf-H2C2_2 326..351 CDD:463886 15/24 (63%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.

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