Protein Alignment CG3065 and Sp6

DIOPT Version :10

• Sequence 1: NP_611861.1
• Gene: CG3065 / 37818
• FlyBaseID: FBgn0034946
• Length: 400
• Species: Drosophila melanogaster
• Sequence 2: NP_001102303.1
• Gene: Sp6 / 363672
• RGDID: 1306768
• Length: 376
• Species: Rattus norvegicus
• Alignment Length: 218
• Identity: 71/218 - (32%)
• Similarity: 103/218 - (47%)
• Gaps: 24/218 - (11%)

  Fly     6 PNTPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASDMILRASTIFEDVKHDEANVENVPHHGV 70
            |..|.|..|..:...:.:..||     .||.:.|.|:.......:..:.....:.:..:||.
  Rat   165 PPHPHPHHLLPAAGGQHLLGPP-----DGAKVLEAAAPESQGLDSSLDAAARPKGSRRSVPR--- 221

  Fly    71 ETEPEDDSHYGGNGNSKIR---IMPSVKLMATTLASDPKRKFV--CPYDNCTKSYGKSSHLRSHL 130
                       .:|.:..|   .:.:.:|.|.......|:|.:  |....|.|:|.|:|||::||
  Rat   222 -----------SSGQTVCRCPNCLEAERLGAPCGPDGGKKKHLHNCHIPGCGKAYAKTSHLKAHL 275

  Fly   131 TWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATHDRQL 195
            .||:|.:||||:...|||.|||||||.|||:||||.|.|.|..|::.|.|||||.||:.||:...
  Rat   276 RWHSGDRPFVCNWLFCGKRFTRSDELQRHLQTHTGTKKFPCAVCSRVFMRSDHLAKHMKTHEGAK 340

  Fly   196 KGSTPKRTVPSSSGGVRLKPPKK 218
            :.:.........:|||...|..|
  Rat   341 EEAAAAAQGEGKAGGVVESPGGK 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3065	NP_611861.1	COG5048	99..>400	CDD:227381	55/122 (45%)
		C2H2 Zn finger	111..133	CDD:275368	10/21 (48%)
		C2H2 Zn finger	141..163	CDD:275368	14/21 (67%)
		C2H2 Zn finger	171..191	CDD:275368	10/19 (53%)
		C2H2 Zn finger	348..368	CDD:275368
		C2H2 Zn finger	376..396	CDD:275368
Sp6	NP_001102303.1	SP6_N	1..255	CDD:411693	18/108 (17%)
		C2H2 Zn finger	259..278	CDD:275368	9/18 (50%)
		COG5048	<261..>336	CDD:227381	45/74 (61%)
		C2H2 Zn finger	286..308	CDD:275368	14/21 (67%)
		C2H2 Zn finger	316..336	CDD:275368	10/19 (53%)