DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and Sp8

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus


Alignment Length:132 Identity:65/132 - (49%)
Similarity:77/132 - (58%) Gaps:16/132 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCT 175
            |....|.|.|||:|||::||.||||.:||||:...|||.|||||||.||||||||||.|.|..|.
Mouse   376 CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCN 440

  Fly   176 KKFSRSDHLTKHLATHDRQLKGSTPKRTVPSSSGGVRLKPPKKQIHSESDSGFHFMAAMVGCGEP 240
            |:|.|||||:||:.||... .||.      .|.||      ||...::|:   |..|....|..|
Mouse   441 KRFMRSDHLSKHVKTHSGG-GGSA------GSGGG------KKGSDTDSE---HSAAGSPPCHSP 489

  Fly   241 SM 242
            .:
Mouse   490 EL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 65/132 (49%)
C2H2 Zn finger 111..133 CDD:275368 11/21 (52%)
C2H2 Zn finger 141..163 CDD:275368 15/21 (71%)
C2H2 Zn finger 171..191 CDD:275368 11/19 (58%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Sp8NP_001366308.1 SP8_N 19..375 CDD:411690
C2H2 Zn finger 379..398 CDD:275368 10/18 (56%)
zf-H2C2_2 390..417 CDD:463886 16/26 (62%)
C2H2 Zn finger 406..428 CDD:275368 15/21 (71%)
zf-H2C2_2 420..443 CDD:463886 16/22 (73%)
zf-C2H2 434..456 CDD:395048 12/21 (57%)
C2H2 Zn finger 436..456 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.

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