DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and Klf1

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_006255316.1 Gene:Klf1 / 304666 RGDID:1309398 Length:381 Species:Rattus norvegicus


Alignment Length:122 Identity:53/122 - (43%)
Similarity:63/122 - (51%) Gaps:25/122 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KLMATTLASD---------PKRK-----------FVCPYDNCTKSYGKSSHLRSHLTWHT----- 134
            :|.||.:|.|         |||.           ..|.::.|.|||.|||||::||..||     
  Rat   259 ELGATAIAGDAGLSPGAAPPKRSRRTLAQKRQAAHTCGHEGCGKSYTKSSHLKAHLRTHTAPCPS 323

  Fly   135 GIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATH 191
            |.||:.||...|...|.|||||.||.|.|||.:||.|..|.:.|||||||..|:..|
  Rat   324 GEKPYACSWDGCNWRFARSDELTRHYRKHTGHRPFCCGLCPRAFSRSDHLALHMKRH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 51/118 (43%)
C2H2 Zn finger 111..133 CDD:275368 12/21 (57%)
C2H2 Zn finger 141..163 CDD:275368 12/21 (57%)
C2H2 Zn finger 171..191 CDD:275368 10/19 (53%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Klf1XP_006255316.1 KLF1_N 28..293 CDD:409227 8/33 (24%)
COG5048 <297..>380 CDD:227381 43/82 (52%)
C2H2 Zn finger 298..317 CDD:275368 11/18 (61%)
C2H2 Zn finger 330..352 CDD:275368 12/21 (57%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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